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scnpilot_solids2_trim150_scaffold_691

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_691_1
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..736
-----------------
DNA (735bp)
protein (245aa)
Uncharacterized protein n=1 Tax=Kazachstania naganishii (strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969 / KCTC 17520 / NBRC 10181 / NCYC 3082) RepID=J7R3M9_KAZNA
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KDA06446.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
mucin-2-like
scnpilot_solids2_trim150_scaffold_691_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

772..1143
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031DB827
Uncharacterized protein {ECO:0000313|EMBL:KJL22603.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
4-amino-4-deoxy-L-arabinose transferase
scnpilot_solids2_trim150_scaffold_691_3
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

1140..2501
-----------------
DNA (1362bp)
protein (454aa)
FAD/FMN-containing dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15] rbh
FAD-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BFFA3 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_691_4
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2494..2889
-----------------
DNA (396bp)
protein (132aa)
CTP pyrophosphohydrolase {ECO:0000313|EMBL:KJL24381.1}; EC=3.6.1.65 {ECO:0000313|EMBL:KJL24381.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQM6_9MICO
NTP pyrophosphohydrolase including oxidative damage repair enzyme
scnpilot_solids2_trim150_scaffold_691_5
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2905..3684)
-----------------
DNA (780bp)
protein (260aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVG3_9MICO rbh
N-acetylglucosamine-6-phosphate isomerase rbh
scnpilot_solids2_trim150_scaffold_691_6
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3677..4624)
-----------------
DNA (948bp)
protein (316aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E5670B rbh
ROK family protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_691_7
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4621..5787)
-----------------
DNA (1167bp)
protein (389aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A1D95 rbh
ROK family protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_691_8
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

5965..7413
-----------------
DNA (1449bp)
protein (483aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E6C7FB rbh
hypothetical protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_691_9
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7641..9860)
-----------------
DNA (2220bp)
protein (740aa)
Isocitrate dehydrogenase [NADP] {ECO:0000313|EMBL:KJL22593.1}; EC=1.1.1.42 {ECO:0000313|EMBL:KJL22593.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
monomeric isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] rbh
isocitrate dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034ACA15 rbh
scnpilot_solids2_trim150_scaffold_691_10
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10009..10467
-----------------
DNA (459bp)
protein (153aa)
speG; histone acetyltransferase HPA2; K00657 diamine N-acetyltransferase [EC:2.3.1.57]
Acetyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFF5_9MICO
Acetyltransferase {ECO:0000313|EMBL:KDA06439.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_691_11
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10671..11684
-----------------
DNA (1014bp)
protein (338aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E15385 rbh
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92774.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_691_12
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11813..13120
-----------------
DNA (1308bp)
protein (436aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Microbacterium barkeri RepID=UPI000303F86C rbh
Multiple sugar-binding protein {ECO:0000313|EMBL:KJL24392.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
sugar ABC transporter periplasmic protein rbh
scnpilot_solids2_trim150_scaffold_691_13
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13196..14203
-----------------
DNA (1008bp)
protein (336aa)
ABC transporter permease n=1 Tax=Microbacterium barkeri RepID=UPI0003651887 rbh
Lactose transport system permease protein LacF {ECO:0000313|EMBL:KJQ54988.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_691_14
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14200..15096
-----------------
DNA (897bp)
protein (299aa)
ABC transporter permease n=1 Tax=Microbacterium barkeri RepID=UPI000364AFDD rbh
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJL24394.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_691_15
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15096..17327
-----------------
DNA (2232bp)
protein (744aa)
Alpha-xylosidase {ECO:0000313|EMBL:KJQ54990.1}; EC=3.2.1.177 {ECO:0000313|EMBL:KJQ54990.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
alpha-glucosidase, family 31 of glycosyl hydrolase; K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177] rbh
alpha-glucosidase n=1 Tax=Microbacterium barkeri RepID=UPI0002DE3692 rbh
scnpilot_solids2_trim150_scaffold_691_16
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17324..18754
-----------------
DNA (1431bp)
protein (477aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
bglJ; beta-glycosidase (EC:3.2.1.-) rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030416A0 rbh
scnpilot_solids2_trim150_scaffold_691_17
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18756..19436)
-----------------
DNA (681bp)
protein (227aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003483A07
Uncharacterized protein {ECO:0000313|EMBL:EYT58317.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_691_18
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19529..21337)
-----------------
DNA (1809bp)
protein (603aa)
ABC transporter n=1 Tax=Microbacterium barkeri RepID=UPI0002E7F3FD rbh
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92768.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
multidrug ABC transporter ATPase/permease; K06147 ATP-binding cassette, subfamily B, bacterial rbh
scnpilot_solids2_trim150_scaffold_691_19
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21334..23208)
-----------------
DNA (1875bp)
protein (625aa)
Putative multidrug export ATP-binding/permease protein {ECO:0000313|EMBL:KJQ54995.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJQ54995.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000316C3E1 rbh
multidrug ABC transporter ATPase/permease; K06147 ATP-binding cassette, subfamily B, bacterial rbh
scnpilot_solids2_trim150_scaffold_691_20
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23555..24055)
-----------------
DNA (501bp)
protein (167aa)
methylated DNA-protein cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRC6_9MICO
Bifunctional transcriptional activator/DNA repair enzyme Ada {ECO:0000313|EMBL:KJL29400.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids2_trim150_scaffold_691_21
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(24052..25578)
-----------------
DNA (1527bp)
protein (509aa)
adenosine deaminase; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DC7598 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_691_22
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25682..26599)
-----------------
DNA (918bp)
protein (306aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8BK85_RHIRD rbh
Amidinotransferase {ECO:0000313|EMBL:KJF72497.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_691_23
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26596..27648)
-----------------
DNA (1053bp)
protein (351aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:KFF59558.1}; EC=4.3.1.12 {ECO:0000313|EMBL:KFF59558.1};; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
ocd; ornithine cyclodeaminase (EC:4.3.1.12) rbh
ornithine cyclodeaminase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287FD0D rbh
scnpilot_solids2_trim150_scaffold_691_24
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27759..28190
-----------------
DNA (432bp)
protein (144aa)
Transcriptional regulator, AsnC family n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XI89_9MICO
AsnC family transcriptional regulator {ECO:0000313|EMBL:KHK96448.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative AsnC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_691_25
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28293..29897)
-----------------
DNA (1605bp)
protein (535aa)
purH; AICAR transformylase/IMP cyclohydrolase PurH; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] rbh
IMP cyclohydrolase n=1 Tax=Microbacterium barkeri RepID=UPI00030FB8BD rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids2_trim150_scaffold_691_26
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29934..30509)
-----------------
DNA (576bp)
protein (192aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
purN; folate-dependent phosphoribosylglycinamide formyltransferase PurN; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTB2_9MICO rbh
scnpilot_solids2_trim150_scaffold_691_27
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30514..31794)
-----------------
DNA (1281bp)
protein (427aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQP0_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL29380.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_691_28
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31874..33322
-----------------
DNA (1449bp)
protein (483aa)
MFS transporter n=1 Tax=Microbacterium yannicii RepID=UPI0002D58BA2 rbh
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92761.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
permease; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease rbh
scnpilot_solids2_trim150_scaffold_691_29
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33398..33961)
-----------------
DNA (564bp)
protein (188aa)
Dimethylglycine N-methyltransferase {ECO:0000313|EMBL:KJL33235.1}; EC=2.1.1.161 {ECO:0000313|EMBL:KJL33235.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Phosphatidylethanolamine N-methyltransferase n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EEA4_9ACTO
type 11 methyltransferase
scnpilot_solids2_trim150_scaffold_691_30
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34159..35061)
-----------------
DNA (903bp)
protein (301aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
sucD; succinyl-CoA synthetase, alpha subunit; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] rbh
succinyl-CoA synthetase subunit alpha n=1 Tax=Microbacterium paraoxydans RepID=UPI00035E64F7 rbh
Displaying items 1-30 of 34 in total

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