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scnpilot_solids2_trim150_scaffold_119_15

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(11707..13758)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 738.0
  • Bit_score: 891
  • Evalue 7.50e-256
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036A9EE8 similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 714.0
  • Bit_score: 868
  • Evalue 3.70e-249
  • rbh
rho; transcription termination factor; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 738.0
  • Bit_score: 807
  • Evalue 3.20e-231
  • rbh

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2052
GTGGAGAACATCTCCGAGACCCAGAACGACAACCAGGCCGCCGAGGCGGCCGCGCCCGAGAAGGCTCCGGCGCGCAAGCGCGCGCCCCGGCGGGCGACCACCGCGTCGGCCGCCGCTGCCGCGTCGGCTGTGACCGAGACGGCTCCGGCCGAGGCTTCCGCTGCGGCCGCCCCGGCCGCGGAGACCGCCCCGGCTGCGGACGAGAAGCCGAAGGCGCCCCGCCGCACGCGTGCCAAGAAGGCGGATGCCGAGACGCTCGACATCCCCACCGCCGCGGCTCCTGCGGCGGACTCGACGCCGGCATCCGAGTCCGCTCCGGCATCCGACTCCGCTCCGGCATCCGACTCCGCCGAGGCTCCGGCGAAGCCCGCCCGCAAGCGCGCCTCGCGCGCGGCGGGCAAGGGCGCCGACGATGCGACCGCGGAGAAGTCCGCGGAGGCCGCAGCCGAGCAGCCCACTGCCGAGCAGGCATCCGACGCGACGGATGCTCCCGCGAAGCGCCCCGCGCGCCGTCGCGGTGCCAAGGCCGAGGCCGCTGCGGAGGGCGACGCCTCCTCCGAGGCGAAGGATTCCGGCGAGAAGGCCGAGCACGCCGACAAGCAGGCCTCGCACGACGAGAACACCTCCGACTCCGAGGGCTCCTCGGACGGCGAGGGCTCCGGCCGCAGCCGCAGCCGTAACCGCAGCCGCAGCCGCGGTCGTGGTGGCAAGGGCGAGAGCGGCAACGGCCAGAACGGCCAGGGCAACGGCCACGGCGGGCAGGACAACGGCCACGGCGACGACGAGCAGGGCTCCGGCCGCAGCCGTCAGCGCAACAAGCGCCGTGGCGGCGGCAACCAGAACGCCGACGAGTTCGAGACCGAGATCGGCGAGGATGACGTGCTGATCCCGATCGCCGGCATCCTCGACGTGCTGGACAACTACGCCTTCGTGCGCACCACCGGCTATCTCGCCGGCGCGAGCGACGTGTACGTCTCGCTGGGGCAGGTCAAGAAGTACAACCTGCGCAAGGGCGACGCGATCGTCGGCGCCATCAAGCAGCCTCGCGAAGGCGAGCAGCAGGGCCGTCAGAAGTACAACGCGCTGGTGAAGGTCGACTCCATCAACGGCCTCTCGCCCGAGGACGCCGGCACTCGCGTCGAGTTCGGCAAGCTCACCCCGCTGTACCCGCAGGAGCGCCTGCGCCTGGAGACCGCGCCCGAGAAGCTCACCCAGCGCATCATCGACCTGGTCGCCCCGATCGGCAAGGGCCAGCGCGGCCTGATCGTCGCGCCGCCCAAGGCCGGCAAGACCATCGTGCTGCAGCAGATCGCGAACGCCATCGCGCAGAACAACCCCGAGGTGCACCTGATGGTCGTGCTCGTGGACGAGCGGCCCGAAGAGGTCACCGACATGCAGCGCACCGTCAAGGGCGAGGTCATCGCGTCGACCTTCGACCGTCCGGCCGAGGACCACACCACGGTCGCCGAGCTGGCCATCGAGCGCGCCAAGCGCCTGGTGGAGCTGGGCCGCGACGTGGTCGTGCTGCTGGACTCGATCACCCGCCTGGGCCGCGCGTACAACATCTCCACCCCGGCCTCAGGGCGCGTGCTGACCGGTGGTGTGGACGCCGCGGCGCTGTACCCGCCCAAGCGCTTCTTCGGCGCCGCGCGCAACATCGAGAACGGCGGCTCGCTGACCATCCTCGCCACGGCGCTGGTCGAGACCGGCTCCAAGATGGACGAGGTCATCTTCGAGGAGTTCAAGGGCACCGGCAACAGCGAGCTGCGCCTGTCGCGCGCTCTCGCCGACAAGCGCATCTTCCCGGCCGTGGACGTGAACGCGTCCAGCACCCGTCGCGAGGAGATGCTGCTCTCGGCCGACGAGGTCAAGATCACCTGGAAGCTGCGTCGTGCGCTCGCGGGCCTGGACCCGCAGCAGGCGCTGGAGGTCGTGCTGGGCAAGCTCAAGGAGACCAGCTCGAACGTCGAGTTCCTCTTCCAGATGCAGAAGTCCATTCCTGCGCCCACCTCGACCGGATCGTCGCACGCGCACGAGAACAGCATCCGCTGA
PROTEIN sequence
Length: 684
VENISETQNDNQAAEAAAPEKAPARKRAPRRATTASAAAAASAVTETAPAEASAAAAPAAETAPAADEKPKAPRRTRAKKADAETLDIPTAAAPAADSTPASESAPASDSAPASDSAEAPAKPARKRASRAAGKGADDATAEKSAEAAAEQPTAEQASDATDAPAKRPARRRGAKAEAAAEGDASSEAKDSGEKAEHADKQASHDENTSDSEGSSDGEGSGRSRSRNRSRSRGRGGKGESGNGQNGQGNGHGGQDNGHGDDEQGSGRSRQRNKRRGGGNQNADEFETEIGEDDVLIPIAGILDVLDNYAFVRTTGYLAGASDVYVSLGQVKKYNLRKGDAIVGAIKQPREGEQQGRQKYNALVKVDSINGLSPEDAGTRVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIAQNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNISTPASGRVLTGGVDAAALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRALADKRIFPAVDVNASSTRREEMLLSADEVKITWKLRRALAGLDPQQALEVVLGKLKETSSNVEFLFQMQKSIPAPTSTGSSHAHENSIR*