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scnpilot_solids2_trim150_scaffold_38_27

Organism: SCNPILOT_SOLID2_TRIM150_Chryseobacterium_39_38

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(27152..28627)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN54_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 492.0
  • Bit_score: 845
  • Evalue 2.40e-242
  • rbh
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EJL74861.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 492.0
  • Bit_score: 845
  • Evalue 3.40e-242
RNA polymerase sigma-54 factor rpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 492.0
  • Bit_score: 831
  • Evalue 1.10e-238
  • rbh

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Taxonomy

Chryseobacterium sp. CF314 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1476
ATGCTGAAACAAAACTTGCAACTGAAACTCGGACAAAAACTGGCTCCTCAGCAAATACAGCTGATGAAGCTGATACAGTTGCATACACTGGAATTTGAAGAGGAACTGGAACGTGAGTTGGAGGAAAATCCCGCATTGGAACGTGCTGCAGAAGAAAAAGAAGATGATTACGAAGAACCCGCGAGTGATTTTGAAGATGAAGGAACCGAAAATATCGATACAGATTTTAATGTAGAAGAATATATTTTTGATGATGAACCGAGCTATAAAACGGCTTCCAACAATTATTCCGCAGATGATGAAGAGTTTGATAATGAAAGCCTGCTCACTGAAGGACAATCATTGTACGATTATCTTCTGGAACAGATCCGACTCATCAATATTGAAGAAGAAGACCGGAAAATTGCAGAATATCTCATCGGAAATCTGGATACAGACGGCTATCTCAGAAGAGAATTAAAATCCATTGTAGACGATCTTGCTTTTTCCGTAGGACTTTATACAACCACTGAAAAATTGGAGGAAATCCTTGAAAATTATGTTCAGAAACTCGATCCTCCCGGTGTTGGTGCCAGAAATCTTCAGGAATGTCTGTTGCTCCAGATCGAGAAAAAAGTAAGCGCAGACAAAGCAGTTACTTTGGCAGCACAAATTCTACGAAATCAGTTTGATGCGCTTACCAATAAGCATTACAACAAAATCATGCAGAAATATGATGTGGATGAGGAAGATCTGAAAGATGCTTTGGAAGAAATTTCAAAACTTTCGCCCAGAGTTGGCGGTAATTTCGATACTCAAACCATCACCATCAATCAGGAAATTATCCCCGATTTTATTATTCAGGTGAAAGAAGGCAAGACAGGGAAACCAGAGGTGATACCTCTGTTGAACAGCAAGAATGCACCAACCCTGCGAGTCTCTGAAGAATATAAAGATATCCTCACGACCTATTCTCACGACAAAAATTCAGCTGAACATAAGCAGGCGGCATTGTTCATTAAACAGAAATTAGATGCAGCAAAATGGTATATTGATGCGATTAATCAAAGGCAAAATACCCTGTTGCAAACCATTACAGCCATTGTGAAACTTCAGAAAGACTACTTCATCACTGGCGATGATAAATCACTGAAACCGATGATTCTGAAAGATGTTGCTGATATTACTGGATTCGACATTTCAACAATTTCAAGAGTAGTAAAAAGTAAATATGCTGATACACCAAACGGAATTGTTTATCTGAAAAACCTCTTTTCGGACAGCTTAACCAACGATGACGGAGAAGAAGTTTCCACCAAAGAAATAAAAATGCATCTTCAGGAAGCTATTGAGAAAGAGAACAAACGGAAACCGTATACAGATGATGCTTTGGTCGGAATTCTGAAAGAAAAAGGCTATAATATTGCCCGAAGAACGATTGCCAAATACCGGGAACAACTCAGTATTCCTGTGGCGCGGCTGAGGAAAGAATTGTAA
PROTEIN sequence
Length: 492
MLKQNLQLKLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALERAAEEKEDDYEEPASDFEDEGTENIDTDFNVEEYIFDDEPSYKTASNNYSADDEEFDNESLLTEGQSLYDYLLEQIRLINIEEEDRKIAEYLIGNLDTDGYLRRELKSIVDDLAFSVGLYTTTEKLEEILENYVQKLDPPGVGARNLQECLLLQIEKKVSADKAVTLAAQILRNQFDALTNKHYNKIMQKYDVDEEDLKDALEEISKLSPRVGGNFDTQTITINQEIIPDFIIQVKEGKTGKPEVIPLLNSKNAPTLRVSEEYKDILTTYSHDKNSAEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTITAIVKLQKDYFITGDDKSLKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKNLFSDSLTNDDGEEVSTKEIKMHLQEAIEKENKRKPYTDDALVGILKEKGYNIARRTIAKYREQLSIPVARLRKEL*