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scnpilot_solids2_trim150_scaffold_38_29

Organism: SCNPILOT_SOLID2_TRIM150_Chryseobacterium_39_38

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(30252..30794)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CMT8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 180.0
  • Bit_score: 283
  • Evalue 1.40e-73
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 180.0
  • Bit_score: 283
  • Evalue 1.90e-73
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 180.0
  • Bit_score: 265
  • Evalue 1.20e-68

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Taxonomy

Chryseobacterium sp. CF314 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
GTGAAAAAAGAAGATTGCTATTTATTGGGGAAAATTACTCGCCGACACGGCCTCGCGGGAAATGTTGTGTTGAAATTGGATACGGATCAGCCTGAATTGTACAATAAACTTGACAATATTCTCGTCGAAATCAATGGATTGCTGGTGCCTTTCTTTATTGAAAAACAACAATGGTCGAAGGAGGATACTAAGCTGATTTTCTTTAAAAATTCTACTGAAGCCATGGTTGATCAGGCGATAGGGCGTAATGTTTTTCTTCCGCTTTCCACTCTTCCTGTGCTCTCTGGGAACAGTTTTTACTATCATGAAATTATCGGATTTCGCCTGCTGGATGAGAATGATGTCGATTTTGGAATAATACAATCGGTGAATGATCAAACTGCACAACATTATTTTGTGACCCTTCTCCATGGAAAACAAATCATCGTTCCTGTCATCAAAGATTGGATTCTGGATGTAAACAGGGAACAGAAAGAAATCAAAATGCAGCTTCCGGAAGGTTTAATGGATGTATTTACCCAGCCTGCGATAAAGGACGAATAG
PROTEIN sequence
Length: 181
VKKEDCYLLGKITRRHGLAGNVVLKLDTDQPELYNKLDNILVEINGLLVPFFIEKQQWSKEDTKLIFFKNSTEAMVDQAIGRNVFLPLSTLPVLSGNSFYYHEIIGFRLLDENDVDFGIIQSVNDQTAQHYFVTLLHGKQIIVPVIKDWILDVNREQKEIKMQLPEGLMDVFTQPAIKDE*