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scnpilot_solids2_trim150_scaffold_1296_3

Organism: SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 ASCG 10 / 38
Location: comp(1912..3555)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Pseudomonas sp. VLB120 RepID=U5VEB8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 545.0
  • Bit_score: 482
  • Evalue 4.60e-133
  • rbh
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 545.0
  • Bit_score: 482
  • Evalue 1.50e-133
  • rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AGZ35197.1}; TaxID=69328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. VLB120.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 545.0
  • Bit_score: 482
  • Evalue 6.50e-133

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Taxonomy

Pseudomonas sp. VLB120 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
ATGTCCCAAGAAGAAGACTACCAGCCGTCGCTGGCCGACTACATCGCCATGGTCAAGCGCCATGTGCTGCTCATCGCCGCCACCTTCATCAGCGTATCGGCGGTGGCCATCGCAGTGGCGGTGCTCTGGCCGCCGGTGTACCAGTCCACCGGCACCATCATGGTCGAATCGCAGCAGATCCCGACGGACCTGGTGCAGGCCACCGTCACCAGCTTTGCCGATGAACGCATCCAGGTGATCCGCCAGCGCGTGATGACGCGCGAGAACCTCATGCGCATCATCGAAAAATTCAAACTCTTCGACGAGCGCTCCATCACCTTCACGCCGTCGGAGCAGGTCGACAAGATGCGCGATCTGATCGACGTGCAGCTGGTCAATGCAAACCTCCAGGGCCAGCGCGGCTCGGCCACCATCGCCTTCAAGGTCTCGTTCGAGGACCGCCGTCCCGACATCGCCCAGCGCGTGGCCAACGAGCTGGTGACGCTGTTCCTGAACGAAAACGTCAAGGTGCGCACCGAGCGCGCCACGCAGACCACGGAATTCCTCACGCAGGAAGCGAACAAGTTCAAGAGCGACCTGGACAAGCTGGAAAGCCAGATCGCCGCCTACAAGCAGGAAAACGGCGCCGCGCTGCCGCAGAACACCGCGCTGGCGATGAACACCATTCAGCGGCTGGAATCCGATCTGCGCAACTCGCAGCGCGACTACAGCTCCGCAGAAGAAGAAGCCCGTTCGCTCGACGTGGAGCTGGCCAGCGCCAAGGTGGCCGTGGCCAGCGCTGCCGCGGCCGCTGGCGGCGGCACGTCCGCCGCGGGCATGGTCGATGCCAACGTGGTGGAACTGCAGAAACTGCGCCAGCAGCTTGCGCAGCTGCAGGAGCTCTACACCGACAGCTACCCCGACGTACGCACCACCAGGCGCCGCATCGCCGCGCTGGAAAAATCCATTGCCGAAGCCGCGAAAGAGCCGCAGCCCGCGCCCGTCGCCGACGGCAACCTGCCGGTGCCGCCCACGGTGGCGGCGGCGCAGCTGGTGGTGGCCAAGATCGAATCGCGCATCGCCTCCGCGCGCTCGCGCATGACGTCGCTGCGCGCCGAGCAGGGCCAGATCCAGGCGCAGCTGCGCGCGGCGGAGAACCAGATGCTCAAGGCCCCGCAGGTCGAGCGCGGGCTGGCTTCGCTGGTGCGCGACCGCGAGGCGGCGCAGCGCAAGTTCGAGGAAATCCGCGCCAAGCAGATGAATGCGCAGGTGGCCGAGAACCTGGAAGGCGAGCAGAAAGCAGAGCGCTTCACACTGCTGGAGCCGCCGATTGCGCCCGATCGCCCGATCAAGCCCAACCGGCGCAAGATGATCGCGCTTGGCCTGGTGCTGGCCGCCGTGGCGGCCGCCGGCATGGTGATGCTGATGGAAACCCTGCGCGGCACGGTGCGCGGCGTGGGCGCGCTCACCGCCATCGTCGGCCAGCGGCCGCTGGTCATCGTGCCCTACATCGCCATTGCCGCGGAAGGCGTGCGCCGGCGCAAGCTGTGGCTGCGCGCCGCGGTGGCGGCGGTGCTGGCGCTGGCGCTGGCGCTGGCGGCCGTTCACTTTTTCTACATGCCGCTGGATTTGCTGGCATTCAAGATCATGCTGCGGCTTTCATAG
PROTEIN sequence
Length: 548
MSQEEDYQPSLADYIAMVKRHVLLIAATFISVSAVAIAVAVLWPPVYQSTGTIMVESQQIPTDLVQATVTSFADERIQVIRQRVMTRENLMRIIEKFKLFDERSITFTPSEQVDKMRDLIDVQLVNANLQGQRGSATIAFKVSFEDRRPDIAQRVANELVTLFLNENVKVRTERATQTTEFLTQEANKFKSDLDKLESQIAAYKQENGAALPQNTALAMNTIQRLESDLRNSQRDYSSAEEEARSLDVELASAKVAVASAAAAAGGGTSAAGMVDANVVELQKLRQQLAQLQELYTDSYPDVRTTRRRIAALEKSIAEAAKEPQPAPVADGNLPVPPTVAAAQLVVAKIESRIASARSRMTSLRAEQGQIQAQLRAAENQMLKAPQVERGLASLVRDREAAQRKFEEIRAKQMNAQVAENLEGEQKAERFTLLEPPIAPDRPIKPNRRKMIALGLVLAAVAAAGMVMLMETLRGTVRGVGALTAIVGQRPLVIVPYIAIAAEGVRRRKLWLRAAVAAVLALALALAAVHFFYMPLDLLAFKIMLRLS*