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scnpilot_solids2_trim150_scaffold_1920_4

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(3799..4605)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=644548 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia neofelifaecis NRRL B-59395.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 250.0
  • Bit_score: 413
  • Evalue 3.10e-112
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 249.0
  • Bit_score: 408
  • Evalue 2.20e-111
  • rbh
Ribonuclease PH n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YPC4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 250.0
  • Bit_score: 413
  • Evalue 2.20e-112
  • rbh

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Taxonomy

Gordonia neofelifaecis → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGTCGGTCCTGTTCGGCGTGACCGGTAGCGTGAAAAACATGACACACCCCCCCTCGAGGGCCGACGGCCGAGCGGACGACGAGCTGCGTCCGGTGCGCTTCACCCGCGGTTTCCAGCTGCATCCCGCCGGGTCGGTGCTGGTCGAGTTCGGCAACACCAAGGTGCTGTGCGCCGCGTCCGCGACGCCCGGCGTGCCGCGGTGGCGGCAGGGTTCGGGCCTCGGCTGGCTCACCGCGGAGTACGCCATGCTGCCGTCCTCGACGCACGAGCGCGTGGAGCGGGAGTCGGTGCGCGGCCGGATCAAGGGGCGCACCCACGAGATATCCCGGTTGATCGGCCGGTCCCTGCGAGCCTGCATCGACCTGGCCGCGTTGGGGGAGAACACCATCGCCATCGACTGCGACGTGCTGCAGGCCGACGGCGGCACCCGCACCGCTGCCATCACCGGCGCCTACATCGCGCTGGCCGATGCCGTGACGTATCTCGGAGCCGCGGGCGTACTGGCCGATCCGCAGCCTCTGTCCTGCCGGATCGCCGCCATCTCGGTGGGCGTCATCGATGGCCGGGTACGTCTCGATCTCCCCTACGAGGAGGACTCGCGCGCCGAGGTGGATATGAACGTGGTGGCCACCGACACCGGCATGCTGGTGGAGGTGCAGGGCACCGCCGAAGGAGCCACGTTCCCACGGTCCACCCTCGATCGACTGCTCGACTCCGCGCTCGCCGGGATCGCCGACCTCACCGCCCTGCAACAGCAGGTCCTGGCAGAGCCCTACCCGCACGCGCTGCCGGAGCCCGCGAAGTGA
PROTEIN sequence
Length: 269
MSVLFGVTGSVKNMTHPPSRADGRADDELRPVRFTRGFQLHPAGSVLVEFGNTKVLCAASATPGVPRWRQGSGLGWLTAEYAMLPSSTHERVERESVRGRIKGRTHEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGAYIALADAVTYLGAAGVLADPQPLSCRIAAISVGVIDGRVRLDLPYEEDSRAEVDMNVVATDTGMLVEVQGTAEGATFPRSTLDRLLDSALAGIADLTALQQQVLAEPYPHALPEPAK*