ggKbase home page

scnpilot_solids2_trim150_scaffold_1067_13

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 11593..12189

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036D42CA similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 179.0
  • Bit_score: 122
  • Evalue 4.40e-25
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 169.0
  • Bit_score: 108
  • Evalue 2.10e-21
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:AGJ54600.1}; TaxID=1265601 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PAMC26508.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 169.0
  • Bit_score: 108
  • Evalue 9.20e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces sp. PAMC26508 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGGTCACCGGTGCAGAGGCGTTGTGGGCGCAAGCCGCTGCCGGCGATCACGCAGCTTTCGCAGCGTTTTACCGAGGGCATGCGGATGCGGTGTTCACGCACGTGTGGGCTCGGGTGGACTGCCGAGCCGACGCGCAGGACCTAGCAGCCGAGGTGTTCGTGGTCGCGTGGCGCAAACGCCGCAGTGTTCGCTTCGATGCTGCGTCCGGGATCCTGCCGTGGTTGTTGGCCACCGCGAACAACCTGCTGCGCAAGCATTACCGCACCCAGGCGCGCCGCAGCCGGTCGGTGCCAGGCCAACGGACGCCGGCTGATGAACCCGATGTGCTCGACGACCTCGTCGCCGTGGAAGACGACCGCCGCGTGCAGGCGTGCTTACGGGTAGCACTTGAAAAGTTGCGACCGGAGGAGCGGCGGGTCATCGAGCTGCGCTTCATCCGGGGCATGAGCCATGCGGCGATCGCCGACTTGTTGGGCGTTCCCGCCGCGACGGCACGCACGCGGCTCCGCCGGGCGGTAGAACAGGCCCGGCGCAGCTTTTTCGGGCTCTACGACACGGACGTGATGTCGCCTTCCTTTCCGGGGGTGGAGCGTTGA
PROTEIN sequence
Length: 199
MVTGAEALWAQAAAGDHAAFAAFYRGHADAVFTHVWARVDCRADAQDLAAEVFVVAWRKRRSVRFDAASGILPWLLATANNLLRKHYRTQARRSRSVPGQRTPADEPDVLDDLVAVEDDRRVQACLRVALEKLRPEERRVIELRFIRGMSHAAIADLLGVPAATARTRLRRAVEQARRSFFGLYDTDVMSPSFPGVER*