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scnpilot_solids2_trim150_scaffold_2540_4

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(4008..4559)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 165.0
  • Bit_score: 195
  • Evalue 6.90e-47
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 175.0
  • Bit_score: 185
  • Evalue 1.60e-44
shikimate kinase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A202 similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 171.0
  • Bit_score: 190
  • Evalue 1.20e-45

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Taxonomy

Saccharopolyspora rectivirgula → Saccharopolyspora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGCTGATCCCGTCGCGGGGGCGCGACCCGGCGGTGGGCCGGCCATCGTGCTGATCGGCCCCCCGGGTGCCGGCAAGTCGACGGTGGCGCGGGCGCTGGCATCGCGCACCGGCTGGACGGTGCGCGACACCGACGCCGACGTCGAGCGCGCCACCGGGCGCAGCGTCGGCGAGATCTTCACACAGTCCGGCGAGGCCGAGTTCCGCCGGTTGGAACGCGACGCAGTGGCCGCCGCGCTGGCCGAGCACACCGGCATCCTGTCGCTGGGCGGCGGCGCGGTGATGGACCCCGAAACGCAACGGCAGCTTGCCGGTCAGCGTGTGGTGTTCCTGTCCATCTCGATGCCGGTGGGCGTGCGGCGCACCGGGATGTCCGACCAGCGGCCGATGTTCGTCGGCGTCAACCCGCGGGCCACCTTCAAGGCGCTGCTGGAAGCCCGGCTGCCGGTGTACCGGTCGCTCGCGGCGGTCGAGATCGATACGGACCACATGACCGCCGCCCAGGTGGCGGACCGGGTGCTCGTCGAGCTCGGCTACCGGACGGAATCGTGA
PROTEIN sequence
Length: 184
MADPVAGARPGGGPAIVLIGPPGAGKSTVARALASRTGWTVRDTDADVERATGRSVGEIFTQSGEAEFRRLERDAVAAALAEHTGILSLGGGAVMDPETQRQLAGQRVVFLSISMPVGVRRTGMSDQRPMFVGVNPRATFKALLEARLPVYRSLAAVEIDTDHMTAAQVADRVLVELGYRTES*