ggKbase home page

scnpilot_solids2_trim150_scaffold_2678_13

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 15100..15315

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=348776 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 71.0
  • Bit_score: 107
  • Evalue 9.70e-21
Ribonuclease VapC n=1 Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QEB6_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 71.0
  • Bit_score: 107
  • Evalue 6.90e-21
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 71.0
  • Bit_score: 107
  • Evalue 2.20e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium tuberculosis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 216
GTGCTGATCGATCTCGACATTCGCATCGAGCCCGTCACTGAGGCGCAGGCGATGATCGCGCGAGCCGCCTATCGGGACTTCGGCCGTGGCAGCGGGCATCCGGCGAAGCTCAATTTCGGCGACTGCCTCTCCTATGCGCTGGCCAAGGACAAGCGCGAGCCGCTGCTCTACAAGGGCAACGACTTCGTGCACACCGACATTCAGGCGGCGATATAG
PROTEIN sequence
Length: 72
VLIDLDIRIEPVTEAQAMIARAAYRDFGRGSGHPAKLNFGDCLSYALAKDKREPLLYKGNDFVHTDIQAAI*