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scnpilot_solids2_trim150_scaffold_4968_6

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(4771..5442)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=2 Tax=Rhodococcus RepID=C3JP82_RHOER similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 212.0
  • Bit_score: 271
  • Evalue 8.60e-70
GntR family transcriptional regulator {ECO:0000313|EMBL:EME14928.1}; TaxID=1278077 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 212.0
  • Bit_score: 271
  • Evalue 1.20e-69
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 210.0
  • Bit_score: 236
  • Evalue 9.70e-60

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Taxonomy

Rhodococcus qingshengii → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGGCCGCGCCGGTGACATCGGATGGCACCGTCGCGAGCCAGCGGATCGCCGCCCACCTGCGTGACGACATCCTGACCGGCGTGTTGCAGCCCGGCGAGCGCATCCGCCAGGAGGACATCGCCGCGCGGGCCGGTTCCAGCCGGCTTCCGGTGCGGGAGGCCCTGCGCATCCTGCACTCGCAGGGCCTGGTCCAGCTCAAGGCGAACAGCGGCGCGTGGGTGTCCACGCTCGACCTGGCGGAATGCCAGGCCATCTACAAGATGCGCGAGCGACTCGAACCGCTTGCGCTGAGCGAGAGCATGCCGCACCTCGACGAGGACACCCTGCAGCGCATCGACGACCTGCAGACGGAGATCGAGCACAACACCGACCAGGACCGATTCCTCGCCCTGGACCGCGAGATGCATCTGCTCTGCTACGTCGGCAGCCCGAACGCCGAGCTCAATCGGATGGTGGAGCGGTTCTGGAACACGACCCAGGCCTATCGCCGCGCGTTCGTGCGGATGAGCGGCCCGGAACGCATGTGGGTCGTCATCGCGGAGCACCAACTGCTGATCGACGCCATCCGGCGACGGGACAGCGACGACGGCGAACGCTTCCTGGTAGCGCACATCCGGCGCACTCGCGAATCCCTCGCGCACCATCCGGAGGTCTTCGACGCGCGGCAGTAG
PROTEIN sequence
Length: 224
MAAPVTSDGTVASQRIAAHLRDDILTGVLQPGERIRQEDIAARAGSSRLPVREALRILHSQGLVQLKANSGAWVSTLDLAECQAIYKMRERLEPLALSESMPHLDEDTLQRIDDLQTEIEHNTDQDRFLALDREMHLLCYVGSPNAELNRMVERFWNTTQAYRRAFVRMSGPERMWVVIAEHQLLIDAIRRRDSDDGERFLVAHIRRTRESLAHHPEVFDARQ*