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scnpilot_solids2_trim150_scaffold_6757_3

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(2002..2298)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein n=1 Tax=Streptomyces sp. e14 RepID=D6K4J9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 99.0
  • Bit_score: 101
  • Evalue 5.20e-19
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EFF91661.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 99.0
  • Bit_score: 101
  • Evalue 7.30e-19
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 95.0
  • Bit_score: 87
  • Evalue 2.50e-15

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Taxonomy

Streptomyces sp. e14 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGGGTGGCGAGCACAGTTCGTACGACGAGGCCGTTCAATCGCGCCGTGGTTTCGCAGAGTTTCGTGACGGGTTCGACGAAGCCCGCCGTGCGTACCTGATCGGCCGCGCGGTTCGGGAACGGCGCATTGCGTTGGGTTTGACGCAAGCGGAATTGGCGACGCGCGCCGGGATGACGCAGTCGGCGCTTTCACGACTGGAAGGTGGTGGCTCGGTTCCCACGATTCCGGTGCTCGATCGGCTCGCCAGCGCCATGGGCACAGAACTCACTGTGGCGTTCGAACCCACCGCGGCCTAG
PROTEIN sequence
Length: 99
MGGEHSSYDEAVQSRRGFAEFRDGFDEARRAYLIGRAVRERRIALGLTQAELATRAGMTQSALSRLEGGGSVPTIPVLDRLASAMGTELTVAFEPTAA*