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scnpilot_solids2_trim150_scaffold_2888_12

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(10845..11228)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FTB4_ISOV2 similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 122.0
  • Bit_score: 120
  • Evalue 1.10e-24
Crp/Fnr family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 122.0
  • Bit_score: 120
  • Evalue 3.40e-25
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEG45278.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 122.0
  • Bit_score: 120
  • Evalue 1.50e-24

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Taxonomy

Isoptericola variabilis → Isoptericola → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGAGTCGGTCGTGCCCGTTCCCGTCACCATCGATGCCGCCGGCGCTGTACCCGTCTACGAACAGATCCGCTCGCAGGTCGCCGGCGCGGTAGCGGACGGTCGGCTGGTGGACGGCGAGCGGCTGCCCGCCGCACGCACTCTCGCCGCTGATCTCGGCATCGCGATCAATACCGTCGGCCGTGCCTATTCGGAGTTGGAAGCGGCAGGAGTGGTCATCAGCCGGCGCCGCGTGGGGACGGTCGTCACCAGCGCCGGCCGTGGCCCCGTCCCGGCGGATGTGCTCGCGGCCGCGCAGCGATTCGCCCTCCGGGCCGCGGCCGCCGGGCTCACCGCTGAGCAGGCGATCGACCTGGTGCGCTCCGCCATGTCCGGCACGGCGTAG
PROTEIN sequence
Length: 128
MESVVPVPVTIDAAGAVPVYEQIRSQVAGAVADGRLVDGERLPAARTLAADLGIAINTVGRAYSELEAAGVVISRRRVGTVVTSAGRGPVPADVLAAAQRFALRAAAAGLTAEQAIDLVRSAMSGTA*