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scnpilot_solids2_trim150_scaffold_4827_5

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 3008..3331

Top 3 Functional Annotations

Value Algorithm Source
protein rarD n=1 Tax=Humibacter albus RepID=UPI0003B78DFB similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 103.0
  • Bit_score: 100
  • Evalue 9.70e-19
RarD protein, DMT superfamily transporter {ECO:0000313|EMBL:EGE42505.1}; TaxID=649189 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus XylebKG-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 108.0
  • Bit_score: 99
  • Evalue 4.00e-18
integral membrane protein; K05786 chloramphenicol-sensitive protein RarD similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 108.0
  • Bit_score: 97
  • Evalue 3.40e-18

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Taxonomy

Streptomyces griseus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGTGGGCGCCGGTGTGGTGACCGCGGTGCCGCTGCTGATGTTCGGCGCCGCGGCCCGGCTGATACCGCTCTCGGTGCTGGGCTTCCTGCAGTACATCAACCCGCTCACCGTGTTCCTGCTCGGCGTCACGTGGGCGGGCGAGCAGATGTCCACATCACGCTGGGCCGGGTTCGCGGTGATCTGGCTGGCGCTGGCCCTGCTGTCCGTCGAGATGGTGCGCGCGGGACAGCGGCGCCGATCCCTGTCCCACGACGTCACGCCCTCTGCCGCGCCCGGCCTGGACGCGGCGGACGGCGCCGCTAGTAGCGCACCTCGAAGGTGA
PROTEIN sequence
Length: 108
MVGAGVVTAVPLLMFGAAARLIPLSVLGFLQYINPLTVFLLGVTWAGEQMSTSRWAGFAVIWLALALLSVEMVRAGQRRRSLSHDVTPSAAPGLDAADGAASSAPRR*