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scnpilot_solids2_trim150_scaffold_8387_3

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(1411..2367)

Top 3 Functional Annotations

Value Algorithm Source
pilus biosynthesis protein PilM n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6F1CD similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 243.0
  • Bit_score: 178
  • Evalue 1.40e-41
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EXG81055.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.9
  • Coverage: 342.0
  • Bit_score: 142
  • Evalue 1.20e-30
pilM; putative type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 217.0
  • Bit_score: 134
  • Evalue 5.60e-29

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGAAACACCGCACGCGCGCCGCTCATGGCGTGTCCGTCGCGAATGGCGACGGGCATGTCATCGGCGTGGATATTGGCGCCACCGCGGTGCGCGCTGCGGTGTTGTCGCCCAAGAATCTCGAAGGGCGACGGGCGGTCAGCGCGCACGGACTCGGGTCCGTGCCGCTGCCGCCCGGAGCGGTGGTGAACGGCCTCGTCATCAACGGCGCGGCCGTCACCGCTGCTCTGAAAGAGCTCTGGTCGGTCAACAAGTTCAACTGCCGCAAGGTGGTGCTGGGCGCCACCAGCCAGCAGGTCACCGTCCGGGACTTCACGGTGCCGCATCTGCCGGCCGTGACCGGCCTGCTCACCGGCATCCCCCGCGACCCGGTGCTGCGCGCCGTGCAGGCCGTGGAGAAGGCGAAACTCCGGGTGGCGCGGGTGGACCTCGCCCCGTTCGGCCTGCTGCGCTCCATCGGGGCCTCGGGGCCGGCCATCGAAGCGCTGGTCGATATCGGTGCCGATCTCAGCACCATCGTCATCCACGTCAACGGCATCGCCAAGGTCGTGCGCGTCGTGCAGCACGGCGGTGCGGCGTGGACCGCGCGCATTGCCGACCAGGCGGACCTCTCGCTGGAGGATGCCGAGTCCACCAAGCGCTCAATCGGGCTGACCGGCACCAGCCTGGCCGCGAATCTGCTGCGCGAATCGATCCGGCCGCTGGTCAATGAGATCCGCGGATCCATCAACTTCTTCGCCTCGCAGCAGCGCGTGACGGTGGAGCGGGTGACGCTCACCGGCGGCAGCGCCCCGCTGCCCGGGCTGGTGGCCCACCTCACCGAGCAGCTCGGCACGTCGACCGAGATCGCCGTCCCCGTGCGGCATATCACCGAAGTCTCCGCCCAGGCGGCCAGCCCTGCTGCGGCGGGCGCGATCTCCGCAGTCGCCGTCGGCCTGGCCATGGGGGTGGCGGCATGA
PROTEIN sequence
Length: 319
MKHRTRAAHGVSVANGDGHVIGVDIGATAVRAAVLSPKNLEGRRAVSAHGLGSVPLPPGAVVNGLVINGAAVTAALKELWSVNKFNCRKVVLGATSQQVTVRDFTVPHLPAVTGLLTGIPRDPVLRAVQAVEKAKLRVARVDLAPFGLLRSIGASGPAIEALVDIGADLSTIVIHVNGIAKVVRVVQHGGAAWTARIADQADLSLEDAESTKRSIGLTGTSLAANLLRESIRPLVNEIRGSINFFASQQRVTVERVTLTGGSAPLPGLVAHLTEQLGTSTEIAVPVRHITEVSAQAASPAAAGAISAVAVGLAMGVAA*