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scnpilot_solids2_trim150_scaffold_8387_6

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(4182..5864)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3781D similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 462.0
  • Bit_score: 692
  • Evalue 3.00e-196
Type II secretion system protein E {ECO:0000313|EMBL:KHD78884.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 502.0
  • Bit_score: 585
  • Evalue 9.50e-164
pulE; General secretion pathway protein E; K02652 type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 503.0
  • Bit_score: 578
  • Evalue 2.00e-162

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Taxonomy

Actinoplanes utahensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1683
ATGGACCCTGCCAGCCAGACCGTGATCGCTGCGCTGCGGGCCCGTGGCACCGATGAGGATGCCCTGCAGCGGGCAGTCGCTACCGCGGTGAGCGGCGAGCGGCCGGTCCGCACCGTCCTGGTGGACGACCAGATCGTCACCGAATTCGAGCTGGCCTCGGCCATCGCCGCCTTCTACGGCATGGAGGTGGGCGACCTCGGCTCGCTCGCCGTGGACCCGACCGCCATGAAGCTGCTGGCCCTGCCGCTGGCCCGCCGGCACCAGATGGTCCCGATCTCCACCACCACGACCACCGTCACGGTGGCGCTCACCGACCCGGGCAACGTGCTCGCGCTGGACGACATCCGCGCCGCCACCGGCCTGCAGGTGCACCCGCTGGTCGTGACGGACGGCGATCTCACCCGCCTGCTGGACCGCTACAGCCGCTCCACCACCGACCTGGACGAGGCGGCCGCCGCGATCGCCGCGGAGGAGTCCATCGAGGACGAGATCGCCGTCGATGACGACGCCCCCGTGGTGCGCTACGTCTCGTCATTGCTGGAGCGCGCGATCACGGCCCGTGGCTCGGACATCCACGTGGAGCCCGGCGAGGACAACGTGCGCGTGCGGCTGCGCATCGACGGCGTGCTGCACGAGATCGACACGGTGCCGCGGCAGATCCAGTCGGCGCTGCTGTCCCGGCTCAAGATCATGTCGGGACTGGACATCACGGAGCGCCGCGTGCCCCAGAACGGCCGTATCACCATGGATCTCGGCGGCCGGCACGTCGATCTGCGCACCGCCACGCTGCCCACGGTGTGGGGCGAGAAGATCGTGCTGCGCATCCTGGACACCGGTGGTATCGACCTCGACCTGCGCAAACTCGGATTCACCGACAAGAACTACGACCGGTTCGCCGCGAGTTTCCGCAAACCGCACGGCATGGTCCTGGTCACCGGACCGACGGGCTCGGGCAAATCGACCACCCTGTACGCCACGCTCGGCGAGATCGCCCGGCCCGAGGTCAACGTGATCACCGTGGAGGACCCGGTCGAGTACCGGATCGGCGGCATCAGCCAGATCCAGGTGAACATCAAGGCCGGCCTCACCTTCGCCGCCGTGCTGCCCGCCATCCTGCGGTCCGACCCGGACGTGGTGCTGGTCGGTGAGATCCGCGACCAGGTGACCGCCCAGCTGGCGATCGAGGCCGCGCTCACCGGCCACCTGGTGCTGTCCACCCTGCACACCAACAACGCGCCGTCGGCGATGACGCGGCTCGTGGAGATGGGCATCGAGCCATTCCTGGTGGGCTCGTCGGTGGACGCCGTGCTGGCCCAACGGCTGGTGCGCCGCCTGTGCGATTGGTGCAAGGAGCCCTACCAGCCGAGCGACCAAGAGCTGGACGCCCGGGCAGCTCTTCCGCGCGGTCGGCTGCCGCTCCTGCTCGGCCACCGGCTACCGCGGCCGGCTCGCCGTCAACGAGGTGATGCCGGTGTCCGAGGAGATCGAGCGGCTCACCGTGGGGCACGCCCCGGCCAGCGAACTCGCCCGGGTCGCCGTAGCGGAAGGTATGACGACACTGCGCGAGGACGGCCTCGCCAAGGCCGCATCCGGCACCACGACGCTCGAAGAAGTGCTGCGCGTCACAGTTTAGGATCCGGACCGGTCAAGTTCTGCGGATCGTTGACGATAAGCCGACCATGA
PROTEIN sequence
Length: 561
MDPASQTVIAALRARGTDEDALQRAVATAVSGERPVRTVLVDDQIVTEFELASAIAAFYGMEVGDLGSLAVDPTAMKLLALPLARRHQMVPISTTTTTVTVALTDPGNVLALDDIRAATGLQVHPLVVTDGDLTRLLDRYSRSTTDLDEAAAAIAAEESIEDEIAVDDDAPVVRYVSSLLERAITARGSDIHVEPGEDNVRVRLRIDGVLHEIDTVPRQIQSALLSRLKIMSGLDITERRVPQNGRITMDLGGRHVDLRTATLPTVWGEKIVLRILDTGGIDLDLRKLGFTDKNYDRFAASFRKPHGMVLVTGPTGSGKSTTLYATLGEIARPEVNVITVEDPVEYRIGGISQIQVNIKAGLTFAAVLPAILRSDPDVVLVGEIRDQVTAQLAIEAALTGHLVLSTLHTNNAPSAMTRLVEMGIEPFLVGSSVDAVLAQRLVRRLCDWCKEPYQPSDQELDARAALPRGRLPLLLGHRLPRPARRQRGDAGVRGDRAAHRGARPGQRTRPGRRSGRYDDTARGRPRQGRIRHHDARRSAARHSLGSGPVKFCGSLTISRP*