ggKbase home page

scnpilot_solids2_trim150_scaffold_8473_5

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(2218..2637)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 137.0
  • Bit_score: 238
  • Evalue 5.40e-60
Ribonuclease VapC n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GL46_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 137.0
  • Bit_score: 238
  • Evalue 3.90e-60
hypothetical protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 136.0
  • Bit_score: 217
  • Evalue 2.90e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gordonia amarae → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GTGGCGGTGACGAGTTGGCTGATCGACAAGTCGGCCTACGCGAGGATGCAGATGGGACAGGCATCGCGAATCGACGAGTGGAATGCCCGGATCGAGCGCGGTCTCGTCCGGATATCGACAGTGACGCGGCTGGAGCTCGGCTTCTCGGCACGTTCGGGAGACGCCGGGCGGCGTGCGTTCGAGCAGCCGCCGCTGTCGATGATGCCTGTAGAGCGGCTGACACCAGCGATGGAGGATCGCGCATTCGAGGTGCAGATGCTCCTGGCGGATCATGGGCAGCATCGGGCACCATCGATCCCCGATCTGCTGATCGCTGCCGTTGCGGAGAAGGCCGGACTGACGGTGCTTGCCGTCGATCAGGACTTCGACCTCATCGCCGAAATCACCGGACAGCCTGTCGAGACGCTTGCGCTGTCGTAG
PROTEIN sequence
Length: 140
VAVTSWLIDKSAYARMQMGQASRIDEWNARIERGLVRISTVTRLELGFSARSGDAGRRAFEQPPLSMMPVERLTPAMEDRAFEVQMLLADHGQHRAPSIPDLLIAAVAEKAGLTVLAVDQDFDLIAEITGQPVETLALS*