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scnpilot_solids2_trim150_scaffold_11007_1

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(67..639)

Top 3 Functional Annotations

Value Algorithm Source
ABC drug efflux pump, inner membrane subunit n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L8Q4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 189.0
  • Bit_score: 265
  • Evalue 3.10e-68
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 189.0
  • Bit_score: 265
  • Evalue 4.30e-68
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 189.0
  • Bit_score: 262
  • Evalue 1.40e-67

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Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCTGGGCCTGTTTCCGTTCATCGTCATGTTCCTCATCACCAGCGTGGCGATGCTGCGCGAACGCACGTCGGGAACCCTGGAGCGGCTAATGACGACGCCGGTCGGCAAGGCGGATCTGCTCTTCGGTTACGGTCTCGCATTCGGCATCGCAGCCACCGTGCAAGGCGTGGTCGCCGCGGCGTTCGCCTACTGGCTGCTCGGCGTCGACACTCCGGGCGCGGCGGGCCTGACCGTCCTGATCTCGGTCGGCGGCGGCGCGCTCGGCGTGAGCATGGGCCTGGTGTCGTCGGCGTTCGCTCGCACCGAGTTTCAGGCGGTGCAGATGTTCCCGGTGGTCGTCATCCCGCAGGCGTTGCTGTGCGGGCTGTTCGTGGCGCGCGACGACATGGCCACGTGGCTCCGGCTGCTCTCGGATGTGATGCCGCTGTCCTATGTCGTGGACGCGCTGCAGCAGATCGGCGCGCAGTCGGCGGTGACGGGCACGTGGTGGCGGGACGTCGGCATCATCGCGGGCAGCGTGCTCCTGGCGCTCGGCCTGGCGGCGGCGACGCTGCGTCGGCGGACGGACTGA
PROTEIN sequence
Length: 191
MLGLFPFIVMFLITSVAMLRERTSGTLERLMTTPVGKADLLFGYGLAFGIAATVQGVVAAAFAYWLLGVDTPGAAGLTVLISVGGGALGVSMGLVSSAFARTEFQAVQMFPVVVIPQALLCGLFVARDDMATWLRLLSDVMPLSYVVDALQQIGAQSAVTGTWWRDVGIIAGSVLLALGLAAATLRRRTD*