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SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_242
In projects: SCNPILOT_SOLID2_TRIM150  |  SCN_92

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 101-150 of 324 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids2_trim150_scaffold_3825
Species: Nakamurella multipartita (72.73%)
11 15181 bp 69.35 247.74 91.85
scnpilot_solids2_trim150_scaffold_3589
Class: Actinobacteria (63.64%)
11 10035 bp 69.78 259.82 86.97
scnpilot_solids2_trim150_scaffold_4079
Order: Micrococcales (57.14%)
11 8911 bp 69.07 251.67 89.32
scnpilot_solids2_trim150_scaffold_4858
Class: Actinobacteria (100%)
11 11667 bp 68.42 251.59 85.01
scnpilot_solids2_trim150_scaffold_4360
Species: Nakamurella multipartita (63.64%)
11 12089 bp 69.20 250.34 90.08
scnpilot_solids2_trim150_scaffold_3950
Class: Actinobacteria (72.73%)
11 14189 bp 71.31 259.57 85.61
scnpilot_solids2_trim150_scaffold_2431
Class: Actinobacteria (63.64%)
11 9870 bp 66.58 243.65 87.51
scnpilot_solids2_trim150_scaffold_5667
Class: Actinobacteria (54.55%)
11 7722 bp 65.03 232.44 81.12
scnpilot_solids2_trim150_scaffold_7318
Class: Actinobacteria (81.82%)
11 11560 bp 71.23 228.14 93.61
scnpilot_solids2_trim150_scaffold_3025
Class: Actinobacteria (90.91%)
11 11180 bp 69.83 253.16 92.95
scnpilot_solids2_trim150_scaffold_5211
Class: Actinobacteria (90%)
10 11004 bp 70.30 253.09 91.74
scnpilot_solids2_trim150_scaffold_8206
Class: Actinobacteria (80%)
10 9473 bp 66.96 244.75 93.27
scnpilot_solids2_trim150_scaffold_4578
Class: Actinobacteria (70%)
10 8065 bp 70.91 238.75 91.58
scnpilot_solids2_trim150_scaffold_2046
Class: Actinobacteria (80%)
10 16644 bp 69.14 243.56 96.27
scnpilot_solids2_trim150_scaffold_7425
Class: Actinobacteria (55.56%)
10 5315 bp 65.10 216.72 84.29
scnpilot_solids2_trim150_scaffold_3908
Class: Actinobacteria (90%)
10 9356 bp 72.02 249.55 92.83
scnpilot_solids2_trim150_scaffold_6038
Order: Micrococcales (60%)
10 10708 bp 68.44 214.70 88.25
scnpilot_solids2_trim150_scaffold_6297
Class: Actinobacteria (60%)
10 8299 bp 66.83 233.68 80.58
scnpilot_solids2_trim150_scaffold_6554
Class: Actinobacteria (80%)
10 5497 bp 68.75 241.93 81.97
scnpilot_solids2_trim150_scaffold_4942
Species: Nakamurella multipartita (60%)
10 10700 bp 70.44 251.96 93.87
scnpilot_solids2_trim150_scaffold_2911
Class: Actinobacteria (50%)
10 8553 bp 66.68 275.04 93.58
scnpilot_solids2_trim150_scaffold_2146
Species: Nakamurella multipartita (80%)
10 11117 bp 69.70 254.81 94.53
scnpilot_solids2_trim150_scaffold_2914
Order: Micrococcales (60%)
10 12114 bp 69.52 239.21 93.12
scnpilot_solids2_trim150_scaffold_2409
Species: Nakamurella multipartita (90%)
10 10470 bp 70.08 245.57 91.23
scnpilot_solids2_trim150_scaffold_7083
Class: Actinobacteria (88.89%)
9 7900 bp 71.46 243.11 76.10
scnpilot_solids2_trim150_scaffold_5442
Species: Nakamurella multipartita (55.56%)
9 7767 bp 71.96 233.58 98.61
scnpilot_solids2_trim150_scaffold_3299
Class: Actinobacteria (66.67%)
9 7703 bp 71.61 258.74 82.18
scnpilot_solids2_trim150_scaffold_3567
Class: Actinobacteria (77.78%)
9 6652 bp 66.24 232.80 92.99
scnpilot_solids2_trim150_scaffold_13178
Class: Actinobacteria (77.78%)
9 8917 bp 70.95 260.12 83.30
scnpilot_solids2_trim150_scaffold_2524
Class: Actinobacteria (66.67%)
9 9488 bp 69.17 229.66 92.01
scnpilot_solids2_trim150_scaffold_10652
Class: Actinobacteria (66.67%)
9 5597 bp 70.43 247.66 99.54
scnpilot_solids2_trim150_scaffold_8473
Class: Actinobacteria (100%)
9 6284 bp 65.37 238.01 90.42
scnpilot_solids2_trim150_scaffold_5234
Species: Nakamurella multipartita (87.5%)
9 10410 bp 71.24 250.95 89.41
scnpilot_solids2_trim150_scaffold_8474
Class: Actinobacteria (66.67%)
9 7571 bp 70.51 238.42 85.15
scnpilot_solids2_trim150_scaffold_5238
Class: Actinobacteria (88.89%)
9 5714 bp 72.16 240.91 99.49
scnpilot_solids2_trim150_scaffold_4094
Class: Actinobacteria (88.89%)
9 9394 bp 70.66 239.96 81.59
scnpilot_solids2_trim150_scaffold_6005
Class: Actinobacteria (88.89%)
9 8279 bp 69.31 248.83 82.04
scnpilot_solids2_trim150_scaffold_4414
Domain: Bacteria (55.56%)
9 7607 bp 71.33 243.35 91.53
scnpilot_solids2_trim150_scaffold_7246
Class: Actinobacteria (77.78%)
9 9420 bp 69.56 235.46 83.85
scnpilot_solids2_trim150_scaffold_3985
Class: Actinobacteria (100%)
9 7747 bp 73.13 240.33 80.86
scnpilot_solids2_trim150_scaffold_7281
Class: Actinobacteria (66.67%)
9 7325 bp 69.47 228.82 93.22
scnpilot_solids2_trim150_scaffold_5633
Domain: Bacteria (66.67%)
9 6692 bp 67.95 256.56 89.97
scnpilot_solids2_trim150_scaffold_6635
Class: Actinobacteria (88.89%)
9 7778 bp 66.80 241.84 84.78
scnpilot_solids2_trim150_scaffold_5395
Domain: Bacteria (77.78%)
9 7270 bp 67.30 246.35 89.22
scnpilot_solids2_trim150_scaffold_2950
Class: Actinobacteria (100%)
9 10630 bp 71.06 251.05 93.87
scnpilot_solids2_trim150_scaffold_12000
Class: Actinobacteria (55.56%)
9 5664 bp 68.91 204.48 77.33
scnpilot_solids2_trim150_scaffold_6401
Class: Actinobacteria (88.89%)
9 7870 bp 69.02 252.50 86.49
scnpilot_solids2_trim150_scaffold_3260
Class: Actinobacteria (100%)
9 9702 bp 69.14 265.04 89.95
scnpilot_solids2_trim150_scaffold_5166
Class: Actinobacteria (100%)
9 8681 bp 69.17 218.22 67.22
scnpilot_solids2_trim150_scaffold_10343
Order: Micrococcales (55.56%)
9 8714 bp 70.76 233.76 72.02
Displaying items 101-150 of 324 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.