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scnpilot_solids2_trim150_scaffold_8342_5

Organism: SCNPILOT_SOLID2_TRIM150_Truepera_66_81

near complete RP 43 / 55 BSCG 41 / 51 ASCG 8 / 38
Location: comp(3785..5164)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 domain protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CUB2_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 444.0
  • Bit_score: 603
  • Evalue 1.50e-169
  • rbh
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 444.0
  • Bit_score: 603
  • Evalue 4.70e-170
  • rbh
RNA binding S1 domain protein {ECO:0000313|EMBL:ADI15697.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 444.0
  • Bit_score: 603
  • Evalue 2.10e-169

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Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 1380
AACCGCGTCATCATCTCGCGCCGCAGCATCCTCGAGGACGAGATCTCTCACCTCAAGGACGACACCCTCAAGAAGCTCGAGCCAGGCGCCCGCCTCGAAGGCGAAGTCGTCGAGATCACCGATTTCGGCGTGTTCGTCAACCTGGGCGGCGTAGACGGCCTCGTGCACCGCTCGGAACTCACGCACGGCCGCTTCAGCCACCCGCGTGACGTCGTCAAGCTCGGCGACATGGTCAAGGTCGAAGTCCTCGACATGGACCTCGAGCGCGAGCGCATCAACCTCTCCATGAAGAAGCTCGTCTCGGATCCCTGGGAGAACGTTCTCGCCCACTACAGCATCGGGCAGCGCGTCTCGGGCACCGTCACGAACCTCACGCCGTTCGGCGCCTTCGTCGAGATCCAGCCGGGCCTCGAAGGCCTCATCCACGTCAGTGAGATGAGCTGGACCAAGCGCATCCGCCACCCGAAGGAAGCCCTTTCGGAAGGCGAGCAGGTCGAGGCGATGATCCTCAAGATCGACATGCAGCAACAGCGCATCTCGCTAGGTCTACGCCAGACCCAGCCCGATCCCTGGAGCAGCCTGCCGGACCGTTACCCGCCCGGCACCGAAGTCACCGGCCCCATCACGGGCATCACCGACTTCGGCGTGTTCATGGAGATCGAAGAAGGCATCGAAGGCCTGGTGCACATCTCCGAGCTCTCCCACGACCACATCGAGAACATCGCCGAGCACTTCAAGAAGGGTGACGAAGTCACCGCGGTCATCCTCAACATCGACCCAGTCGAGCAGCGCGCCAGCCTCTCCCGCAAGCGCATGCTGCCCTTCACCCCAGAGAACGCCGCCGAGTTCGGAGGCAACGCCCCAGCAGGCGGCGCCGCCAGGGCCGGAGGCTACGCGCAGCCAGGCGGCGCAGCCGCAGGAGGCAACCGCGGCCGCCGTGGTCGCCGCAGCCGCGACATCGACTACGACTACAGCTACGTCACCGATGCGGCAAGCAGCAAGACGACCACCAAGCTCGGCGACGTCTACGCCGACCTCTTCGCGCAGTTCGGGCTTGGCGACACCAAGGCCGAGACCGAAGCCCCCAAGGAAGTCGCCGCTAAGGCCCCAGCCAAGTCCGAGCCGGCCGTCAAGGCCGAGAAGCCGGCCCCAGCCGTCAAGGCGCAGTCCGACGAACCCGTCGACCCCAACGCCATCGACGCCGCGGAAGCCGCCGCCCTCCTCACCGCCGCGTTCCGCCAAGGCAAGCGCCCAGGCGCAGCGGCAGACGAGGCGGCAGACGCAGTGGCCGATTACGCCGACGCCAACCACGACACCGTAGAAGAAACGCACACCGCGGACGCCGACTACGGGTCAGACGACGACGACACCCAGGCCTAA
PROTEIN sequence
Length: 460
NRVIISRRSILEDEISHLKDDTLKKLEPGARLEGEVVEITDFGVFVNLGGVDGLVHRSELTHGRFSHPRDVVKLGDMVKVEVLDMDLERERINLSMKKLVSDPWENVLAHYSIGQRVSGTVTNLTPFGAFVEIQPGLEGLIHVSEMSWTKRIRHPKEALSEGEQVEAMILKIDMQQQRISLGLRQTQPDPWSSLPDRYPPGTEVTGPITGITDFGVFMEIEEGIEGLVHISELSHDHIENIAEHFKKGDEVTAVILNIDPVEQRASLSRKRMLPFTPENAAEFGGNAPAGGAARAGGYAQPGGAAAGGNRGRRGRRSRDIDYDYSYVTDAASSKTTTKLGDVYADLFAQFGLGDTKAETEAPKEVAAKAPAKSEPAVKAEKPAPAVKAQSDEPVDPNAIDAAEAAALLTAAFRQGKRPGAAADEAADAVADYADANHDTVEETHTADADYGSDDDDTQA*