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scnpilot_solids2_trim150_scaffold_29_22

Organism: SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_39_37

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(24901..25545)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUZ0_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 199.0
  • Bit_score: 197
  • Evalue 1.50e-47
Uncharacterized protein {ECO:0000313|EMBL:KIC95445.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 205.0
  • Bit_score: 208
  • Evalue 9.30e-51
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 199.0
  • Bit_score: 197
  • Evalue 4.80e-48

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 645
ATGATAGGTCAATCTATTGCATTAGCCGATATGACTCCCGATGGAGAATTGGTTCATCGTATAAAAACCGGTGAAAAGGAATTATTTGAAATTATCATGCGAAGGTATAACCAAAGGATGTACCGCATTGGAATGTCAATACTGGCCGATGAAGCAGAAACGGAAGATGCGATGCAAAATGCCTATATCAGTTGTTACGAACATTTACAGCAGTTTGAGAGCCGGAGCGCTTTTAGTACCTGGCTTACCAGGATCATGATCAATCAATGTTTTGAACAAAAGCGTAAACAAAAAAAATATACCATGAAGGTTGAAAATACGGGCCATACAGCCACTTCATCTTCACCCGATGCTTTATTGGTAAATAAAGAATTAGGAAATGTTATGGAAAAGGCAATAGCCCAGCTTCCGGAAATTTATCGTACCGTTTTTGTATTGCGTGAAATTGAAGATCTTTCAGTAAAAGAAACATCAGAGGTATTAAGCATCGAAGTGCCGAATGTAAAAGTGAGATTAAACAGGGCCAAAACAATGCTTAAAGAAAGTTTAAGCGGTTATATGAATCATCATGTATATGATTTTCATCTTTCTAAATGCGACAGGGTTGTGAGTTTTGTAATGAACCGGGTATTGGCGATGCCTTAA
PROTEIN sequence
Length: 215
MIGQSIALADMTPDGELVHRIKTGEKELFEIIMRRYNQRMYRIGMSILADEAETEDAMQNAYISCYEHLQQFESRSAFSTWLTRIMINQCFEQKRKQKKYTMKVENTGHTATSSSPDALLVNKELGNVMEKAIAQLPEIYRTVFVLREIEDLSVKETSEVLSIEVPNVKVRLNRAKTMLKESLSGYMNHHVYDFHLSKCDRVVSFVMNRVLAMP*