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scnpilot_solids2_trim150_scaffold_676_29

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(29422..30039)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6T0_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 203.0
  • Bit_score: 262
  • Evalue 3.70e-67
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 203.0
  • Bit_score: 262
  • Evalue 1.20e-67
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 203.0
  • Bit_score: 262
  • Evalue 5.20e-67

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGTCCGAGACCCGTCTGGTCGCCCAGCCTCGCACCGAATTCGGCAAGGGCGCCGCCCGCCGCACCCGCAAGGCCGGCCTGGTACCGGCCGTGCTGTACGGCCATGGCTCCGATGCTCGCCACCTTTCGCTGCCCGCGCTGGAGTTCTCCCGGGCGATCAAGGGTGGCGTCAACACGGTGCTGACCATCGAGATCGACGGCCAGGACCAGCTCGCGCTGCCGCGCGCGATCGTGCGTCATCCGCTGCGCGATTATCTGGAGCACATCGACCTGCTGCTGGTGCGGCGCGGCGAGAAGGTCACCGTCGAGGTGCCGGTGCACCTGTTGGGTGAGGCCGCCCCCGGCACCCTGGTGCTGCACGAGCTGAACACCCTGGCGGTCGAGGTGGACGCGCTGGCGATCCCGGAGCGCGTCGAGGTGTCGATCGACGGCGCCGAGCCGGGCACCCAGGTCACCGCGGGTCAGATTCCGCTCCCGGCGGGCGCCACGTTGTCCACCGACCCGGAAGCATTGGTCGTCGCCATCCAGCTGGCCCCGACCGCGGAAGCCATGGAAGGCGAGTCCGAGGAAGCCGCCGCCGCGGAACCCGTCGCCGCGCCCACCCCCGACGAGGGCTGA
PROTEIN sequence
Length: 206
MSETRLVAQPRTEFGKGAARRTRKAGLVPAVLYGHGSDARHLSLPALEFSRAIKGGVNTVLTIEIDGQDQLALPRAIVRHPLRDYLEHIDLLLVRRGEKVTVEVPVHLLGEAAPGTLVLHELNTLAVEVDALAIPERVEVSIDGAEPGTQVTAGQIPLPAGATLSTDPEALVVAIQLAPTAEAMEGESEEAAAAEPVAAPTPDEG*