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SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_17

In projects: SCNPILOT_SOLID2_TRIM150

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 229 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids2_trim150_scaffold_373
Order: Hydrogenophilales (61.29%)
65 52724 bp 63.36 16.22 85.72
scnpilot_solids2_trim150_scaffold_344
Order: Hydrogenophilales (100%)
50 53326 bp 65.80 16.61 95.45
scnpilot_solids2_trim150_scaffold_384
Order: Hydrogenophilales (95.65%)
46 44850 bp 64.46 20.27 94.31
scnpilot_solids2_trim150_scaffold_400
Order: Hydrogenophilales (68.18%)
44 43740 bp 64.38 13.61 93.26
scnpilot_solids2_trim150_scaffold_453
Order: Hydrogenophilales (74.36%)
41 39952 bp 64.80 17.94 90.71
scnpilot_solids2_trim150_scaffold_409
Order: Hydrogenophilales (65.79%)
38 42490 bp 65.87 14.23 90.42
scnpilot_solids2_trim150_scaffold_368
Species: GWE1_Thiobacillus_62_9_curated (55.26%)
38 46542 bp 64.09 17.81 93.55
scnpilot_solids2_trim150_scaffold_687
Order: Hydrogenophilales (88.24%)
34 28525 bp 66.03 16.20 94.24
scnpilot_solids2_trim150_scaffold_1101
Species: GWE1_Thiobacillus_62_9_curated (54.55%)
33 38119 bp 64.75 20.01 92.63
scnpilot_solids2_trim150_scaffold_602
Order: Hydrogenophilales (63.64%)
33 31620 bp 63.77 14.64 84.83
scnpilot_solids2_trim150_scaffold_754
Species: GWE1_Thiobacillus_62_9_curated (53.13%)
32 26819 bp 63.94 13.36 91.57
scnpilot_solids2_trim150_scaffold_813
Order: Hydrogenophilales (93.75%)
32 25152 bp 64.08 15.89 94.78
scnpilot_solids2_trim150_scaffold_814
Order: Hydrogenophilales (96.55%)
30 25141 bp 62.57 22.48 96.11
scnpilot_solids2_trim150_scaffold_1408
Order: Hydrogenophilales (96.67%)
30 24006 bp 65.17 16.27 92.19
scnpilot_solids2_trim150_scaffold_899
Order: Hydrogenophilales (89.29%)
28 23417 bp 63.80 17.09 93.14
scnpilot_solids2_trim150_scaffold_831
Order: Hydrogenophilales (96.3%)
28 24815 bp 64.90 18.24 90.07
scnpilot_solids2_trim150_scaffold_705
Species: GWE1_Thiobacillus_62_9_curated (51.85%)
27 27877 bp 63.48 13.57 94.28
scnpilot_solids2_trim150_scaffold_763
Order: Hydrogenophilales (62.5%)
25 26357 bp 62.78 12.52 88.27
scnpilot_solids2_trim150_scaffold_852
Order: Hydrogenophilales (80%)
25 24410 bp 66.16 13.84 95.01
scnpilot_solids2_trim150_scaffold_849
Species: GWE1_Thiobacillus_62_9_curated (50%)
24 24488 bp 65.52 19.97 96.48
scnpilot_solids2_trim150_scaffold_958
Order: Hydrogenophilales (60.87%)
23 22451 bp 64.40 27.05 93.90
scnpilot_solids2_trim150_scaffold_1306
Species: GWE1_Thiobacillus_62_9_curated (68.18%)
23 17918 bp 63.67 18.20 89.23
scnpilot_solids2_trim150_scaffold_1088
Order: Hydrogenophilales (82.61%)
23 19963 bp 65.21 13.71 93.13
scnpilot_solids2_trim150_scaffold_1241
Order: Hydrogenophilales (95.45%)
22 19105 bp 65.64 17.82 94.61
scnpilot_solids2_trim150_scaffold_1303
Species: Thiobacillus denitrificans (68.18%)
22 17188 bp 64.57 15.50 86.57
scnpilot_solids2_trim150_scaffold_807
Species: GWE1_Thiobacillus_62_9_curated (50%)
22 25318 bp 63.10 19.87 94.78
scnpilot_solids2_trim150_scaffold_1090
Order: Hydrogenophilales (86.36%)
22 19937 bp 64.16 14.51 84.33
scnpilot_solids2_trim150_scaffold_1690
Order: Hydrogenophilales (100%)
21 13764 bp 63.55 16.41 95.89
scnpilot_solids2_trim150_scaffold_1344
Order: Hydrogenophilales (57.14%)
21 16758 bp 63.21 12.15 82.03
scnpilot_solids2_trim150_scaffold_1601
Order: Hydrogenophilales (61.9%)
21 14529 bp 62.55 16.42 82.97
scnpilot_solids2_trim150_scaffold_839
Order: Hydrogenophilales (100%)
21 24685 bp 64.48 16.45 92.87
scnpilot_solids2_trim150_scaffold_1982
Order: Hydrogenophilales (90%)
20 21240 bp 65.48 10.54 94.46
scnpilot_solids2_trim150_scaffold_1254
Order: Hydrogenophilales (100%)
20 17838 bp 65.77 19.32 94.27
scnpilot_solids2_trim150_scaffold_1526
Order: Hydrogenophilales (100%)
20 16131 bp 64.82 15.14 93.38
scnpilot_solids2_trim150_scaffold_1819
Order: Hydrogenophilales (90%)
20 14415 bp 64.30 18.98 89.37
scnpilot_solids2_trim150_scaffold_1310
Order: Hydrogenophilales (90%)
20 17091 bp 66.09 18.86 96.79
scnpilot_solids2_trim150_scaffold_1364
Species: GWE1_Thiobacillus_62_9_curated (55%)
20 16556 bp 64.64 15.82 88.92
scnpilot_solids2_trim150_scaffold_1662
Species: GWE1_Thiobacillus_62_9_curated (80%)
20 13969 bp 61.88 14.54 87.00
scnpilot_solids2_trim150_scaffold_1198
Order: Hydrogenophilales (89.47%)
19 18442 bp 62.53 18.46 89.66
scnpilot_solids2_trim150_scaffold_1226
Order: Hydrogenophilales (89.47%)
19 18123 bp 65.68 19.45 93.78
scnpilot_solids2_trim150_scaffold_1363
Order: Hydrogenophilales (100%)
19 16571 bp 65.56 15.97 95.93
scnpilot_solids2_trim150_scaffold_1949
Species: Thiobacillus denitrificans (50%)
18 19939 bp 65.66 16.99 92.35
scnpilot_solids2_trim150_scaffold_1783
Order: Hydrogenophilales (82.35%)
18 12978 bp 64.79 18.75 89.81
scnpilot_solids2_trim150_scaffold_3347
Species: GWE1_Thiobacillus_62_9_curated (52.94%)
17 7172 bp 58.52 26.62 95.41
scnpilot_solids2_trim150_scaffold_1387
Order: Hydrogenophilales (94.12%)
17 16271 bp 64.40 15.16 97.44
scnpilot_solids2_trim150_scaffold_1166
Order: Hydrogenophilales (87.5%)
16 18777 bp 64.92 17.37 96.53
scnpilot_solids2_trim150_scaffold_1743
Order: Hydrogenophilales (50%)
16 15630 bp 62.48 19.40 91.48
scnpilot_solids2_trim150_scaffold_1793
Order: Hydrogenophilales (93.33%)
15 14977 bp 64.07 16.12 86.71
scnpilot_solids2_trim150_scaffold_1608
Species: GWE1_Thiobacillus_62_9_curated (53.33%)
15 14453 bp 65.58 18.33 93.78
scnpilot_solids2_trim150_scaffold_1909
Order: Hydrogenophilales (100%)
15 12347 bp 65.81 13.14 93.15
Displaying items 1-50 of 229 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.