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scnpilot_solids2_trim150_scaffold_1425_10

Organism: SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 7230..7499

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 89.0
  • Bit_score: 136
  • Evalue 1.90e-29
DNA-directed RNA polymerase subunit omega n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAM9_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 89.0
  • Bit_score: 136
  • Evalue 1.30e-29
RNA polymerase Rpb6 similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 89.0
  • Bit_score: 136
  • Evalue 4.20e-30

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 270
GTGATTGAAGAGTTGAAGGAAGAAGAGATCGTCAACAAGGTCGGCGGCCGGTTCAAGCTCTCCACCCTGATCCAGAAGCGGATGATCGCGCTGAACCAGGGCGCCCGCCCGCTGATCGACGGCCGCGGCCTCGATAAGATGTCGATGGTGATCCAGGAGATCATGCAGGACAAGATCTACCTGGACATGACCGACAAGCTCCAAATCAACGAGACGTCCGAGGAGTACGTCGAGGGCGAGACGGTCGATCTTACCCAGCCGTCGGATTAA
PROTEIN sequence
Length: 90
VIEELKEEEIVNKVGGRFKLSTLIQKRMIALNQGARPLIDGRGLDKMSMVIQEIMQDKIYLDMTDKLQINETSEEYVEGETVDLTQPSD*