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scnpilot_solids2_trim150_scaffold_518_15

Organism: SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(20267..21043)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DSV7_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 258.0
  • Bit_score: 484
  • Evalue 5.70e-134
  • rbh
FliA/WhiG family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 258.0
  • Bit_score: 484
  • Evalue 1.80e-134
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 258.0
  • Bit_score: 484
  • Evalue 8.10e-134

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 777
ATGGCAACCAAGGTGGATGTGGATGTGACCGAACTCTGGCGGGAGTTCAAGGAACAACCCACCACGGAGCTGCGGAACCGGTTGGTCGAGCGTTACTTGTCGCTGGTCAAGTACAACGCCGAGCGGATCTGGCAGCGGCTCCCCGACGGGGTCGACCTCGACGACCTGATTTCCGCGGGGGTCTTCGGCTTGATGGACGCCATCGACGCCTTCGACCTCTCCCGCGGCGTCAAGTTCGAGACCTACTGCGTCCCCCGCATCCGCGGCGCCATGCTCGACGAGCTGCGGACCATGGACTGGGTCCCCCGCCTGGTGCGCTCCAAGGCCACCAAGATGGAGGAGGCCCGCAAGGAGCTGGAGGCCCGCCACGGCCGCCCCCCCACCGACGTCGAGCTCGCCGAGCGGCTCGGGCTCCCCATGGCGGAGTACGAGAAGATGGCCGCCGACGCCAACGCCGTCGGCCTCATCAGCCTCAACAAGAAGTGGTACGAGACCGACGGCTACAAGGACGTCCGCGAAATCGACATCCTCGAGGACAAGAAGGGCGAGGACCCCACCCGAAGGCTCCAGCGCAAGGACCTCATGCGCATGGTGACCAAGGGCCTCAACCGCAACGAGCGCCTCATCATCATCCTCTACTATTATGAAGAACTGACGATGAAGGAGATCGGCGCCACGCTCGACCTCTCCGAGTCGCGGGTCTCGCAGATGCACTCCTCGATCATCCAGCGACTTCAGTCCCAGCTCTCCCTCCGCCGCCCCGAGTTCGGCACCTGA
PROTEIN sequence
Length: 259
MATKVDVDVTELWREFKEQPTTELRNRLVERYLSLVKYNAERIWQRLPDGVDLDDLISAGVFGLMDAIDAFDLSRGVKFETYCVPRIRGAMLDELRTMDWVPRLVRSKATKMEEARKELEARHGRPPTDVELAERLGLPMAEYEKMAADANAVGLISLNKKWYETDGYKDVREIDILEDKKGEDPTRRLQRKDLMRMVTKGLNRNERLIIILYYYEELTMKEIGATLDLSESRVSQMHSSIIQRLQSQLSLRRPEFGT*