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scnpilot_solids2_trim150_scaffold_1021_12

Organism: SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 17247..19010

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 645.0
  • Bit_score: 834
  • Evalue 9.40e-239
Transcription termination factor Rho n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJE7_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 645.0
  • Bit_score: 834
  • Evalue 6.70e-239
  • rbh
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 645.0
  • Bit_score: 834
  • Evalue 2.10e-239
  • rbh

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1764
ATGGCCAACGAGACCCGCCCCCGCCGCGAGCCCTCCAGCGGCTCCCGCATCCGCAAAAGCGCCGCGTCGTCCGCCCGGGACGAGAACGCCGCGACCGCCTCCGAGTCCGCCGCGACGCCCGAGCGCCCCTTCCGCGAGGAGGCCCCCGCCGATCGCGAGCCGATCCGGTTCATCCGCGCCCGCGACCGAACCGCCGAGGCCGCGGCCGACCGACACGAGCCCGAGCCCCGCGTCGGCATGACCCTGCGCGAGCGGATCGCCCGCGACCGCGCCGAGCGCGAGGCCGCCGCCCACGACGGCGCCCCCGTCCGCGACCGCGACTACGCCCCCCCCGTCCGCGACCGCGGCCGCGACGCCGCCGACCGCGACTATCCGACCCCCCTCCGCGGCGCGACGCCCGACCGCCCCGAGCCCGTCTCCGAGCCGTTCATGGACGTCGAGGACGACGACGTCTTCGGCGACGTCGCGATCCACGACCGCTACGAGGACATCAAGCGCGGCGAGATCCATCTCACCGAGCTGCAGAAGATGACCATGCCCCAGCTCATCAAGACGGCCAAGTCCGAGGGGATCTCCGACTACACGGGGCTCAAGAAGCAAGACCTGATCTTCAAGATCCTCAAGGAACGGGTCAAGCAGAACGGCCTGATGTACGGCGAGGGGACGCTGGAGGTCCTCCCCGACGGCTTCGGCTTCCTCCGCAGCCCCGACTACAACTACCTCCCCTGCCCCGACGACATCTACGTCTCCCCCAGCCAGATCCGCCGCTTCGGGCTGAAGACCGGCGCCATCGTCTCCGGCCAGATCCGCCCCCCCAAGGAGAACGAACGCTACTTCGCCCTGCTCCGCGTCGAGGCCGTCAACTTCGAGGACCCCGACACCCTCAGCGAGAAGGTCGGCTTCGACGACCTCACGCCGACCCACCCCCAGGGCCGAATCCGCCTGGAGACCGACGAGGAAGAGATCAGCACGCGCGTCCTCGACCTGATCGCCCCGATCGGCTTCGGCCAGCGCGGGCTGATCGTGGCGCCCCCCAGGGCCGGCAAGACCATCCTCCTGCGGAAGATCGCCAACAGCGTCCTGGCCAACCACCCGGAAACCTACCTCATGGTCCTGCTCATCGACGAGCGGCCCGAGGAAGTCACCGACATGGAACGGGCGGTCAAGGGCCCCACCGCCGAGGTCATCAGCTCCACCTTCGACGAGCCCCCCGCGCGCCACGTCCAGGTGGCCGAGATGGCCATCGAGAAGGCCAAGCGCATGGTCGAGTACGGCAAGGACGTGGTGATCCTCCTGGACTCGATCACCCGGCTGGCCCGCGCCTACAACGCCGAGGCCCCCCACTCCGGCAAGGCCCTCGCCGGCGGCATCGACGCCGCGGCCCTCCAGAAGCCCAAGCGGTTCTTCGGCGCCGCCCACAAGATCGAAGAGGCCGGCAGTCTCACCATCCTCGCCACCGCGCTGGTCGACACCGGCAGCCGGATGGACGACGTGGTCTACGAGGAGTTCAAGGGGACCGGCAACATGGAACTCCGCCTGGACCGCCGCCTCGTCGAGAAGCGGGTCTGGCCGGCCGTCGACGTCTCCACCTCCGGCACCCGCCGCGAGGAACTCCTCATGGACGAGGACGAACTGCGCCGCGTCTGGCTGGTCCGCCGCGAGCTCAACGACATGAACCCCGTCGAGGCCATGGAGTTCCTGACCGCCCGGCTGGGCAAGTTCAAAGACAACGCCGAGTTCCTGGCCAGCCTGAAGGTCGACTGA
PROTEIN sequence
Length: 588
MANETRPRREPSSGSRIRKSAASSARDENAATASESAATPERPFREEAPADREPIRFIRARDRTAEAAADRHEPEPRVGMTLRERIARDRAEREAAAHDGAPVRDRDYAPPVRDRGRDAADRDYPTPLRGATPDRPEPVSEPFMDVEDDDVFGDVAIHDRYEDIKRGEIHLTELQKMTMPQLIKTAKSEGISDYTGLKKQDLIFKILKERVKQNGLMYGEGTLEVLPDGFGFLRSPDYNYLPCPDDIYVSPSQIRRFGLKTGAIVSGQIRPPKENERYFALLRVEAVNFEDPDTLSEKVGFDDLTPTHPQGRIRLETDEEEISTRVLDLIAPIGFGQRGLIVAPPRAGKTILLRKIANSVLANHPETYLMVLLIDERPEEVTDMERAVKGPTAEVISSTFDEPPARHVQVAEMAIEKAKRMVEYGKDVVILLDSITRLARAYNAEAPHSGKALAGGIDAAALQKPKRFFGAAHKIEEAGSLTILATALVDTGSRMDDVVYEEFKGTGNMELRLDRRLVEKRVWPAVDVSTSGTRREELLMDEDELRRVWLVRRELNDMNPVEAMEFLTARLGKFKDNAEFLASLKVD*