ggKbase home page

scnpilot_solids2_trim150_scaffold_10005_2

Organism: SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 676..1767

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 353.0
  • Bit_score: 501
  • Evalue 1.20e-138
tRNA-dihydrouridine synthase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNF0_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 353.0
  • Bit_score: 501
  • Evalue 8.30e-139
  • rbh
TIM-barrel protein, nifR3 family similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 353.0
  • Bit_score: 501
  • Evalue 2.60e-139
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1092
TTGAGCGCCGCCGAATCATTGTACCCGCCGGTCCCGCCGATCGCCCGCCAGCCGCTCGCGATCGGGGGCGTGTCGGTCCCCTCGCGGTTCTTCCTCGCCCCGCTGGCCGGCTACACGAGCCTGGCCTTTCGGCTGGCCGTGCGCTCCTTGGGAGGGCTGGGGCTGGCGACGACCGACCTGGTCAACGCGCGCTCGCTGATCGAAGGCCGCCGTCGGGCGCTCGAGCTTTCCGAGACCGGCCCGGGCGACCAGCCGCTGTCGATCCAGATCTACGGCCACGTCGCGCCCGAGATGGACCAAGCCGCGCGGCACGTCGCGGCGAACGGGGCGACGATCGTGGACATCAACATGGGTTGCCCCGTCCGCAAGGTGGTGCGGATCGGCGGCGGCTCGGCCCTGATGCGCGAGATCGACGCCGCCGTCGAGTTGGTTTCCACCGTGGTGAAGGCCGCGGGCGTTCCGGTGACGGTCAAGATGCGGCTGGGGTGGGACTCCAAGACGCTGTCGGCCCCGGAGTTGGCGCGGGCGTTCGAGCAGATCGGCGTGGCCGGGGTCGTCATCCACGGCCGGACCCGCGCCCAGGGGTTCACGGGGTCGGTCAACCGCGAGGGGATCAAGGCGGTGGTGGACGCGGTCGACTCGATCCCGGTGGTCGCCAACGGCGACGTCCGCACGATCGCCGAGGCGGCCTCGATGCTGGAGGAGACCGGCGCCGCCGCGGTGTCGATCGGCCGGGGGGCGCTGGCCAACCCGTTCTTCTTCCGCCAGCTCGACCATTGGGTCCGAACCGGCGACCCCGGCCCCCCGCCGTCGTTCGAGGACCGGCTCGACTTCATGTCGACGCACTTCCACGGCCTTCTGGAGCGCCGGGGCGAGCACTTCGCCTGCCTTCAGTTCCGCAAAATGCTCAAGTGGTATTACCACTTCACGAGGATGCCCAAGCCATTCTATCTGGAACTCATCAACCTGCGCTCCTCCGAGTTGTTCGACCGCGTCGTCGCCCAGGTCCGCGCCGAGGGCCCCACGTCGCCCCTCCCCGGCCACTTCGAGGTCCACGTCCCGGTCCCCTCCGGGCCGGTCGAGGCGTGGTGA
PROTEIN sequence
Length: 364
LSAAESLYPPVPPIARQPLAIGGVSVPSRFFLAPLAGYTSLAFRLAVRSLGGLGLATTDLVNARSLIEGRRRALELSETGPGDQPLSIQIYGHVAPEMDQAARHVAANGATIVDINMGCPVRKVVRIGGGSALMREIDAAVELVSTVVKAAGVPVTVKMRLGWDSKTLSAPELARAFEQIGVAGVVIHGRTRAQGFTGSVNREGIKAVVDAVDSIPVVANGDVRTIAEAASMLEETGAAAVSIGRGALANPFFFRQLDHWVRTGDPGPPPSFEDRLDFMSTHFHGLLERRGEHFACLQFRKMLKWYYHFTRMPKPFYLELINLRSSELFDRVVAQVRAEGPTSPLPGHFEVHVPVPSGPVEAW*