ggKbase home page

scnpilot_solids2_trim150_scaffold_71_85

Organism: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(88917..89936)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 340.0
  • Bit_score: 467
  • Evalue 1.70e-128
S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 339.0
  • Bit_score: 463
  • Evalue 4.30e-128
16S rRNA methyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000312AD30 similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 337.0
  • Bit_score: 475
  • Evalue 6.00e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGACGGCAGGCCCCGGCGGCACGTCAGACGCCGGTGGCGGACCGGCCCGCCACATTCCGGTTCTCCTTTCCGAAGTCCTCGAAATGCTCCAGCCGACGCCCGGCAAGGTGATCGTGGACGGAACCTTCGGCGCCGGCGGCTATACGCGCGCGCTCCTCGATGCGGGCGCCGATGTCGTGGCCATCGATCGGGACCCGGACGCGATCGCCGCCGGACGGCCGCTGGAAGCGGCGTCAAGCGGGCGGTTGCGGCTGGTCGAGGCGCCGTTTTCCCGACTCGACGAATGCGCTGGAGGCACGGTGGACGGCGTCGTGCTCGATATCGGCGTCTCCTCCATGCAACTGGACGAGGCGGAGCGCGGCTTTTCCTTCCGTCATGACGGGCCGCTCGACATGCGTATGGCGCAGGCGGGGCTCACCGCAGCCGATGTCGTCAACACTTTCAAGGCCGGCGACCTGACCCGCATATTCGGCATTCTGGGCGAGGAGCGCCATGCCGGGCGCATCGCCCGCATGATCGAAAGGCGGCGGGTCGACCGGCCTTTCACGACGACCCGCGACCTGGCGCAGGCAATCGAGGCGGCGATCGGGAACAATCCGAAGGAAAAGATCCATCCGGCGACGCGCGTCTTCCAGGCGCTCAGGGTCTTCGTGAACGACGAACTGGGCGAACTGGCCGCGGCACTTTTCGCCGTCGAGCGTGTCCTGAAGCCGGGCGGACGCCTTGCGGTCGTCTCTTTCCATTCGCTTGAGGACCGCATCGTCAAGCGCTTCCTCGCCGACCGTTCGGCGGCCGCGGCGGTGTCGCGCCACCTGCCGGTACAGACGGCCGCGCCTGCGACTTTCGACAAGCCGGCGCGCATCGTCACCGCCTCCGGGGAAGAGATTGCGCAAAACCCCCGCGCGCGGTCGGCCAAATTGCGTGGTGCCGTCCGCACGGCCGAGCCGGCGCGCGCCGCCGATCCGTCCATTTTTGCATTGCCGAGGCTGCCTGAGCCCCGGCTCGCGGCAGAGAGGTAG
PROTEIN sequence
Length: 340
MTAGPGGTSDAGGGPARHIPVLLSEVLEMLQPTPGKVIVDGTFGAGGYTRALLDAGADVVAIDRDPDAIAAGRPLEAASSGRLRLVEAPFSRLDECAGGTVDGVVLDIGVSSMQLDEAERGFSFRHDGPLDMRMAQAGLTAADVVNTFKAGDLTRIFGILGEERHAGRIARMIERRRVDRPFTTTRDLAQAIEAAIGNNPKEKIHPATRVFQALRVFVNDELGELAAALFAVERVLKPGGRLAVVSFHSLEDRIVKRFLADRSAAAAVSRHLPVQTAAPATFDKPARIVTASGEEIAQNPRARSAKLRGAVRTAEPARAADPSIFALPRLPEPRLAAER*