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scnpilot_solids2_trim150_scaffold_188_9

Organism: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(9130..10026)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV40_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 288.0
  • Bit_score: 433
  • Evalue 1.80e-118
  • rbh
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 288.0
  • Bit_score: 433
  • Evalue 5.50e-119
  • rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 288.0
  • Bit_score: 433
  • Evalue 2.50e-118

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAGCAGCCGCGGGGTTCCCGCCATACACAGCGAAGGTGGTCTTTCGCGCTACCTGTCCGAGATCCGGAAGTTCCCGCTTCTGGAACCGGAGGAGGAGTACATGCTGGCCAAGGCATGGAAGGAGCACGAAGACCCCGAAGCCGCGCGCAAACTTGTCACCAGCCACCTGCGGCTGGTGGCCAAGATTGCCATGGGCTATCGCGGTTATGGCCTGCCCGTCTCCGAAATCATTTCCGAAGGCAATGTCGGGCTGATGCAGGCGGTCAAACGCTTCGAACCGGACAAGGGTTTCCGGCTGGCCACCTATGCCATGTGGTGGATCAGGGCCTCGATCCAGGAATACATCCTGCGGTCGTGGAGCCTGGTCAAAATGGGCACCACGGCGGCGCAGAAGAAGCTGTTCTTCAATCTGCGCAAGGCCAAGAGCAAGATCGACGCGATCGAGGAAGGCGACCTGCACCCCGATCAGGTGAGCGAGATCGCCCGCAAGCTGGGTGTGCGCGAACATGAGGTGGTGGAGATGAACCGCCGCCTTGCCGCGCCCGATTCCTCGCTCAACACGCCGCTGCGGTCGGATTCCGAATCCGAATGGCAGGACTGGCTGCAGGACGACACGCTGGATCAGGAATCACGCCTGGCCCAGCGGGAGGAGTTGAGCGAGCGCCGCGCGCTTCTCTCCACCGCACTTGGCGAATTGACCGAGCGCGAGCGCGACATCATCGAGGCGCGCCGTCTCAAGGACGAGCCGGTGACCCTGGAAGAACTGTCGCAGAAATACGGCGTCAGCCGCGAACGCGTGCGCCAGATCGAGATGCGCGCTTTCGACAAGCTGCAGACCGCGATGAAGCAATCGCTGACGGCGCGGCGCAGCACCACGCTCGAACCCGCACACTGA
PROTEIN sequence
Length: 299
MSSRGVPAIHSEGGLSRYLSEIRKFPLLEPEEEYMLAKAWKEHEDPEAARKLVTSHLRLVAKIAMGYRGYGLPVSEIISEGNVGLMQAVKRFEPDKGFRLATYAMWWIRASIQEYILRSWSLVKMGTTAAQKKLFFNLRKAKSKIDAIEEGDLHPDQVSEIARKLGVREHEVVEMNRRLAAPDSSLNTPLRSDSESEWQDWLQDDTLDQESRLAQREELSERRALLSTALGELTERERDIIEARRLKDEPVTLEELSQKYGVSRERVRQIEMRAFDKLQTAMKQSLTARRSTTLEPAH*