ggKbase home page

scnpilot_solids2_trim150_scaffold_188_17

Organism: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 14997..15200

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380D88B similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 66.0
  • Bit_score: 98
  • Evalue 3.00e-18
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 66.0
  • Bit_score: 96
  • Evalue 3.60e-18
Putative cold shock-like transcription regulator protein {ECO:0000313|EMBL:EAP89420.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 69.0
  • Bit_score: 96
  • Evalue 1.20e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oceanicaulis sp. HTCC2633 → Oceanicaulis → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGACCATCGGAACAGTAAAGTTCTTCAACACCACCAAAGGCTTTGGCTTCATCGCGCCGGATGGCGGCGGCAAGGACGTTTTCGTCCACGCCACGGCCGTCGAAGCGGCGGGTCTGCGCAGCCTCAATGAAGGCCAGCGCGTCGAGTTCGACATCCAGCCGGATGCGCGCGGCTCGAAGGCGGCGAACCTCAAGGCCGTCTGA
PROTEIN sequence
Length: 68
MTIGTVKFFNTTKGFGFIAPDGGGKDVFVHATAVEAAGLRSLNEGQRVEFDIQPDARGSKAANLKAV*