ggKbase home page

scnpilot_solids2_trim150_scaffold_188_21

Organism: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(18295..20223)

Top 3 Functional Annotations

Value Algorithm Source
Possible membrane transport protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N349_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 620.0
  • Bit_score: 544
  • Evalue 2.00e-151
membrane transporter similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 620.0
  • Bit_score: 544
  • Evalue 6.20e-152
Possible membrane transport protein {ECO:0000313|EMBL:CAE29286.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 620.0
  • Bit_score: 544
  • Evalue 2.80e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1929
ATGCCATCGCTGCCCATCCTGCCGCCGCAGCCGGACCTGCAGCCCCACCCGCAGCATGGGCTGCAGCGCGTGTTCATGGTTTCGGTGATCGCCGCCATTTCGGTGGCCGGGCTGCATTTCGGCCGCACCGTGCTGGTACCGGTGGCCGTGGCCGTGCTTCTCGCCTTCGCGCTTTCCCCGCTGGTCGAGTTGTTGCGGCGTATCCGGCTTGGCCGGGTGCCATCGGTCATCCTGGCGGTTCTGGGCGCGATGGTGGTGATCGTGGTCCTGGGCACCTTCATCGGCGGGCGGGTGGCGACGCTTGCACTGCAGATGCCGCATTATCAGGCCAATCTGTCCCAGAAGCTGGATTCGATCCGCGGCACCGCTTCGCATAGCGGGCTGATGCAGCGCGCCGCCTCGCTGCTGAAGACCTTCAACAACGAAATTCTGGGCCGCGGCGCCCAGTCCACGCCGAAACTGCAATTGCCCAGCGGCAATGAACAGGCGGTCAAACCCGTTCCGGTTCAGATCACCCAGCCGGAAGTCACCCCGATCGACGTTCTGGAGAATATCGTCGGGCCGCTGCTCGAACCGCTTGCGACCATCGCGATCGTGATCGTGTTCGTGGTTTTCATCCTGCTGCAGAAGGAGGATTTGCGCGACCGCGTGATCAGCCTTGCCGGTTCGCGCGATCTGCAGCGGGCGACGGCGGCGCTGGACGATGCGGGCGCGCGGCTGTCGCGCTACCTGCTGCTGCAGACCACGCTGAACGCCACCTTCGGCATGCTGATCAGCGGCCTTCTGTGGCTGATCGGGGTACCGCTTCCCGGCCTGTGGGGCCTGATGGCGGCCATCCTGCGCTTCGTGCCCTATATCGGCATTCCGATTGCCGCGGCCCTTCCGGCCGCGCTTGCGATTGCGGTCGATCCCGGCTGGTCGATGGTGGTGTGGACGCTGATCGCGTTCTTCGGCCTCGAAGCCGTGGTCGGCCAGGTGGTGGAGCCCTATCTCTACGGCCGCAATGTCGGGCTTTCCGCCGTTGCGGTGGTGGTGGCCGCCGCGTTCTGGACGCTGCTGTGGGGGCCGGTGGGCCTTCTGCTGTCCACCCCGCTCACCATGTGTCTGGTGGTGATGGGCCGCCATGTGCCGCAACTGAAATTCCTCGACACGCTTCTGGGCGACCGCCCGCCCCTTGCGGCGGAGGAGACATTCTATCTGCGCCTTCTGGCTGCCGACCCGGACGAGACCGCCCATCAGGCCGAACTGTTCCTGCGTGAGCAGCCGCTTTCGGTTTATTACGACGAGGTGGCGATGCGCGCGCTGGCGCTGGCGCAAAAGGATATGGATCGCGGCGCGCTGAGCGAGGAACGCGCGAACCAGATTCTGGAAACCATTCGCGACCTGATCGAAAACCTGTCGGACCGGGAAGAGAACAACGCCGCCAGTATTGAAGAAGAACCACCGTCGGGCCGCGTGGTGTTTCAGGAAGCCGATCTGGCGCCCGGCTGGCGCGGCACACCGGTTTTGTGCGTGGCGGGCCGCGGGCCGCTGGACGAAGCCGCCGCCGCGCTTTTGGTGCATCTGTTGGAACGGCGGGGATTGAAAGCGCGCGTGGTGGCATCGGGCGATGCGCTTCCCAGCACGGTGCAGAATATCGCCGCCGACGGCGTGCAGGTGATCTGCTTGTCCTATCTCGATCCCGGCAATTACAAGAACGCGCGCTATCTGGTGCGCCGGATGAACCGCCAGATTCCCAATGCAACGGCCATTGCCGGTTTCTGGGCCGCCTTTGAAAGCGACAGCCATTATCTCGATTCCGTTGAGGCCAGTGGTTGCGATCTGGTGGTCACAAGTTTGCGCGAGGCGCTGGAATGCGTGCTGTCACTGGCGCGAAGTGCCGCAAATCCGCAAGAAAAAAAAGATGACGCCGATTTCGTTGCGGCGTGA
PROTEIN sequence
Length: 643
MPSLPILPPQPDLQPHPQHGLQRVFMVSVIAAISVAGLHFGRTVLVPVAVAVLLAFALSPLVELLRRIRLGRVPSVILAVLGAMVVIVVLGTFIGGRVATLALQMPHYQANLSQKLDSIRGTASHSGLMQRAASLLKTFNNEILGRGAQSTPKLQLPSGNEQAVKPVPVQITQPEVTPIDVLENIVGPLLEPLATIAIVIVFVVFILLQKEDLRDRVISLAGSRDLQRATAALDDAGARLSRYLLLQTTLNATFGMLISGLLWLIGVPLPGLWGLMAAILRFVPYIGIPIAAALPAALAIAVDPGWSMVVWTLIAFFGLEAVVGQVVEPYLYGRNVGLSAVAVVVAAAFWTLLWGPVGLLLSTPLTMCLVVMGRHVPQLKFLDTLLGDRPPLAAEETFYLRLLAADPDETAHQAELFLREQPLSVYYDEVAMRALALAQKDMDRGALSEERANQILETIRDLIENLSDREENNAASIEEEPPSGRVVFQEADLAPGWRGTPVLCVAGRGPLDEAAAALLVHLLERRGLKARVVASGDALPSTVQNIAADGVQVICLSYLDPGNYKNARYLVRRMNRQIPNATAIAGFWAAFESDSHYLDSVEASGCDLVVTSLREALECVLSLARSAANPQEKKDDADFVAA*