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scnpilot_solids2_trim150_scaffold_1105_3

Organism: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 2841..3740

Top 3 Functional Annotations

Value Algorithm Source
hopanoid biosynthesis associated protein HpnK n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B790ED similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 301.0
  • Bit_score: 326
  • Evalue 2.30e-86
  • rbh
Cellobiose phosphotransferase system celC {ECO:0000313|EMBL:GAO55488.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 289.0
  • Bit_score: 328
  • Evalue 1.10e-86
hopanoid biosynthesis associated protein HpnK similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 295.0
  • Bit_score: 321
  • Evalue 3.10e-85
  • rbh

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
TTGATCAAGGGCCTGATTGTCACGGCGGACGATTTCGGCGCCGCGCCGGAAGTCAACGCGGCGGTCGAGACCGCACACCGTGATGGTATTCTCTCTGCTGCCAGCCTGATGGTGGCGGCCCCTGCGGCAAAAGATGCGGTGGCGCTGGCAAACCGTCTGCCGGGTTTGCGTGTGGGCCTTCATATCGTGCTGGTGGAAGGCCGCCCGGTTCTGTTGCCTTCACGGATTCCCGATCTGGTCGATGCTTCAGGTCAGTTCCGTACCGATATGGCCATGACCGGCGCGCGCATGTTTTTTCTGCCGCATGTGCGCCGTCAACTCACGGCTGAGATTACCGCCCAGTTCGAAGCTTTTCGCGCCACGGGTCTCGCCCTCGATCACGTCAATGCGCACAAGCATTTTCATCTCCATCCCACCATTGCGAACACCATCCTGCGTATCGGCCGCCGTTTCGGCATGACCGGGCTGCGAGTGCCGCGCGAACCGCGCGCGGTCATAGATGCGGTGGCGTCGAATAGTCCTGTCTCGCCCCCGCAGGGGGAGGGGGGCAGGGTGAGGGGGAATGGAGGTGGACTCGAATCCCTCGCGCACCTGTTCGCTGCCCGTCTTGCACGGCGCATGCGCGGGCAGGGGCTGCTGGTGCCGGATCGGGTCTTCGGCCTCAGATGGTCGGGTGCGATGACGCGTGATCGCCTGCTGGGGTTGATTGGCCGCCTACCTGATGGGTTGAGCGAGATTTATCTCCATCCCGCAACCGGGTCCTATCCGGGGTCGGCCCCCGGTTACCGCTATGCGGAGGAGTTGGCGGCGCTTACCGACCCGGCTGTTGTCGCCGCGGCGTCGGGCTTTGCGCGCGGTGGATTCGCCGATTTTCAGGGCGGCAAATCGCGCGCAGCCTGA
PROTEIN sequence
Length: 300
LIKGLIVTADDFGAAPEVNAAVETAHRDGILSAASLMVAAPAAKDAVALANRLPGLRVGLHIVLVEGRPVLLPSRIPDLVDASGQFRTDMAMTGARMFFLPHVRRQLTAEITAQFEAFRATGLALDHVNAHKHFHLHPTIANTILRIGRRFGMTGLRVPREPRAVIDAVASNSPVSPPQGEGGRVRGNGGGLESLAHLFAARLARRMRGQGLLVPDRVFGLRWSGAMTRDRLLGLIGRLPDGLSEIYLHPATGSYPGSAPGYRYAEELAALTDPAVVAAASGFARGGFADFQGGKSRAA*