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scnpilot_solids2_trim150_scaffold_1643_3

Organism: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 1943..3220

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTF7_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 403.0
  • Bit_score: 417
  • Evalue 1.90e-113
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:CDO59281.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 408.0
  • Bit_score: 432
  • Evalue 7.80e-118
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 403.0
  • Bit_score: 417
  • Evalue 5.80e-114

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
GTGTGCGCATTGCCGGACACACGGGCGAAACCGAACGCCTGTGTTCATCTCAACCGCAATGCGCTCCGGGCGGAACTGGCACAGGCGATCGATGCCGCGCGCGCGCAGAATCTGCATTGCGCCTTTCTCGTCGCCTCCATCGACCGCGTGAAGATGATCAACGACACCTATGGTTTCGATGCCGCCGATGAGGTGATCGTGGCCGTGGGTGAGCGCATCGCGCGCGCGCTCAGGGCAAGCGATGTGGTGGGCCGCATCGCCGGCAACAAGCTCGGCGTCATCCTGACCAATTGCAGCGAGCGTGAAATCGCTCTGGTGGCCGACCGTTTGCGCGGCGTTACCCGCGAGCAGGTGATCGAGACGCATGCCGGCAAGGTGTCGGCGACGATTTCGGTCGGTGCGGTCAGGCTGCCGTCTGGTGCGGCCTCAAGCCAGGAGGCGATGCTGCGCGCGGAGGAGGCGCTGGAGCGCGCCCGCAGTTCCGGCCGCGACGGGTTTGCCGTCTACGCGAAATCGCCGCAGCTCGAAACCGCGCGGCTCCGGCTGATGGCGATTGCCGATGAGGTGGTGGCCGCGCTGGAAGACAAGCGGCTGGTGTTCGCCTATCAGCCGATTGTCGAGGCCAGGACCCGCAAACCCGTTCATTACGAATGTCTGCTGCGCATGACCCGGCCCGACGGCACCATCGCGAGTGCGGGCCAGTTCGTTCCCGCCGCCGAACAATTGGGGCTGGTGCGCCTTGTCGATCGCCATGCGCTGGAAATGACGGTGGCGGCCCTTCATGCCCATTCCGATCTCGTGCTGGCGGTGAATGTTTCCGGCACCACGTCGGGCGATCCGTCCTGGCTGCACTCCTTCATCCAGTATGTGCAGAACAATCACACGGTCGCCCGGCGCATCATCGTGGAATTGACCGAGACCGCGGCGCTGCATCATTTCGAAGAGAATGCGCGCTTTGTCTCGCAATTGCGCGAGATGGGCTGTCGCGTCGCGATCGACGATTTCGGCGCCGGCTACACCTCATTCCGCAATCTGCAGATGCTCAGGGTGGACATGGTGAAGATCGATGGCGCCTATGTGCGCGATCTTTCCACCTCGCCCGAAAACCAGATTTTCGTGCGCACGCTGGTCGATCTCGCGAAGAATTTCGATCTGAAAACGGTGGCCGAATGGGTCGGTTCCGCCGAGGATGCCCAGATGCTGGAAAGTTTCGGCGTCGATTATTTCCAGGGCTTCCATTTCGGCGAGCCGCAGTTGAAGCCGGACTGGATGGCTTAG
PROTEIN sequence
Length: 426
VCALPDTRAKPNACVHLNRNALRAELAQAIDAARAQNLHCAFLVASIDRVKMINDTYGFDAADEVIVAVGERIARALRASDVVGRIAGNKLGVILTNCSEREIALVADRLRGVTREQVIETHAGKVSATISVGAVRLPSGAASSQEAMLRAEEALERARSSGRDGFAVYAKSPQLETARLRLMAIADEVVAALEDKRLVFAYQPIVEARTRKPVHYECLLRMTRPDGTIASAGQFVPAAEQLGLVRLVDRHALEMTVAALHAHSDLVLAVNVSGTTSGDPSWLHSFIQYVQNNHTVARRIIVELTETAALHHFEENARFVSQLREMGCRVAIDDFGAGYTSFRNLQMLRVDMVKIDGAYVRDLSTSPENQIFVRTLVDLAKNFDLKTVAEWVGSAEDAQMLESFGVDYFQGFHFGEPQLKPDWMA*