ggKbase home page

scnpilot_solids2_trim150_scaffold_81_5

Organism: SCNPILOT_SOLID2_TRIM150_Xanthomonadales_66_14

near complete RP 46 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: comp(6120..7424)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344B5DC similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 455.0
  • Bit_score: 604
  • Evalue 8.40e-170
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:EIL91719.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 449.0
  • Bit_score: 573
  • Evalue 2.90e-160
type IV / VI secretion system protein, DotU family; K11892 type VI secretion system protein ImpK similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 432.0
  • Bit_score: 503
  • Evalue 8.20e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGAATACCCCGCGCGGCCCCTTCGACGACGACCGCGAAGATCGCACCGTGGTGCGTCCGCACGGCACGCCACCGCCGCCACCCTCCCCGGCGCGCGCCACGCCGCCATCGGTTGCCGCACCCGCCGATGTCAACGCGGTGCTGGCGGGCAGCGGCAACCCGCTGCTGCGCGCGGCCACGCCGTTGCTGCTGTTGGGCGTCGAACTGCGGCACAGCGCGACGCCGCCGGACATCACCCGCCTGCGCGAACAAAGCGTGGCGCAAATCCGCCACTTCGAAAGCCGCGCGCAAACGGCCAACGTTCCGGCGCAGACCGTCACCGCCGCACGTTACGTGTTGTGCACGATGCTGGACGAAGCCGTGCTCAACGCGCCGTGGGGCGAGGCGAGCGGCTGGTCGCAAAAAACCCTGCTGGTCACCTTCCACGGCGAATCCTACGGCGGCGCCAAGTTCTTCCAGATCCTGGATCGCCTCAACGCCGATGCCTCCCGCCACATCGACTTGATCGAATTGATGTACGTCTGTCTTGCGCTCGGATTCGCCGGACGCTACCAGATCGAAGCCGGCGGCCGCGCCAAACTGGCGGACATCCAGGAAGACCTGTACCGCCGCATCCGCAGCCAGCGTGCACCGGCCGCGGCGCAACTGTCGCCGCACTGGCGCGGCATCGAGGACCGCCGCAATCCGCTGATCCGCTACGTGCCGCTGTGGGTGATCGCGGCGGCCGCGGCGTGCATCCTGCTGGGCGTTTTCCTGTTCCTGTTCGCGCGTTTGAACACGGCGTCCTCGCCTGTCAGCGCGCAAGCCGCGCAAATCGGACTGGAAACCGTGGTGCTTCCCGATCACGCGCAACGTCCGCTGCCGGCGCGCAAGACCTTGAAGGAGTTGCTGGCGCCCGAAGCCGCGGCCGGCAAGCTCGAAATCATCGAGCAGGACAACGGCCGCGAACTGGTGCGGCTCGCCGCCACCGGCATGTTCGCTTCCGGTGGCGTGGACGTCAGCGACCAGACGCTGCCGGTCCTGAATGCCATCGCCACCGCCCTCAACCAGGTGCCCGGGCGGGCGATCGTGGTCGGCAACACCGACGACGTGCCTATTCGTTCGCTGCAGTTCAAGGACAACTTTGCCTTGTCCGCCGCGCGCGCCAAGGCCGTCGTGCAAATCCTGGACAAGACGCTCGACGATCCTGGACGACTTGAATCCAGCGGCGCCGGCGCCTCCAAACCGATCGCGTTGCCTCCCGACCTTCCGGCCAACCGCGCGCGCAATCGCCGTGTGGACCTGATCTACATCCCGGAGGCCTGA
PROTEIN sequence
Length: 435
MNTPRGPFDDDREDRTVVRPHGTPPPPPSPARATPPSVAAPADVNAVLAGSGNPLLRAATPLLLLGVELRHSATPPDITRLREQSVAQIRHFESRAQTANVPAQTVTAARYVLCTMLDEAVLNAPWGEASGWSQKTLLVTFHGESYGGAKFFQILDRLNADASRHIDLIELMYVCLALGFAGRYQIEAGGRAKLADIQEDLYRRIRSQRAPAAAQLSPHWRGIEDRRNPLIRYVPLWVIAAAAACILLGVFLFLFARLNTASSPVSAQAAQIGLETVVLPDHAQRPLPARKTLKELLAPEAAAGKLEIIEQDNGRELVRLAATGMFASGGVDVSDQTLPVLNAIATALNQVPGRAIVVGNTDDVPIRSLQFKDNFALSAARAKAVVQILDKTLDDPGRLESSGAGASKPIALPPDLPANRARNRRVDLIYIPEA*