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scnpilot_solids2_trim150_scaffold_1168_29

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 30289..30873

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WT67_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 194.0
  • Bit_score: 363
  • Evalue 1.50e-97
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 194.0
  • Bit_score: 363
  • Evalue 6.00e-98
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG87823.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 194.0
  • Bit_score: 363
  • Evalue 2.70e-97

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAACGACGCTGATACCGACGCTGATGCCACCGACCGCATGCTGCTCCAGCGCATGTCGACGGGCGACCGCGCCGCACTGGCGGTGCTGTATCGCGGCTACCACGGCAGGTTGTGCCGCTTCCTGTCCCGCCTGACCCGGCGTCCCGACATCATCGAAGAGGTCATCAACGACTGCTTCTGGATCGCCTGGCAGAAAGCAGGCAACTTCCACGGCGATTCGCGCGTTTCGACCTGGATCATGGGCATCGCCTACCGCTGCGGGTTGAAGGCACTGCGCCAGCATGGCGATGAACCCGTCGCCGAGGATGCCGTGCCGGAAAGCCGCGTTCCGGCCCACAACCCGGATGAGGACCGCGAATTGCGCGACTGGCTGGGCAAGGGCCTCGTCCACCTCTCGGTGGATCAGCGAGTGGTGATCGAGCTGGTCTATGGCGTGGGACACTCGCTGGATGACGTTGCCGCGATCATGCAATGTCCGGTCGGCACGGTGAAGGCGCGGCTGTTCCATGCGCGCGTGAAGCTGCGCAACGTCCTTCCCTCTCTGGCTGGAGACTCGCCGATGCGCGAGGAGAATGTGCCATGA
PROTEIN sequence
Length: 195
MNDADTDADATDRMLLQRMSTGDRAALAVLYRGYHGRLCRFLSRLTRRPDIIEEVINDCFWIAWQKAGNFHGDSRVSTWIMGIAYRCGLKALRQHGDEPVAEDAVPESRVPAHNPDEDRELRDWLGKGLVHLSVDQRVVIELVYGVGHSLDDVAAIMQCPVGTVKARLFHARVKLRNVLPSLAGDSPMREENVP*