ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_438_1

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 1..543

Top 3 Functional Annotations

Value Algorithm Source
Peptidase M4, thermolysin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP92_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 179.0
  • Bit_score: 329
  • Evalue 2.20e-87
Peptidase M4, thermolysin {ECO:0000313|EMBL:EIM01284.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 179.0
  • Bit_score: 329
  • Evalue 3.00e-87
Zinc metalloprotease (elastase) similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 179.0
  • Bit_score: 289
  • Evalue 6.00e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
TCGATGAACTTCGGCGACGGCGCCAGCTACTTCTATCCGCTGACCTCGCTGGACGTCACCAGCCACGAAATCAGCCACGGCTTCACCGAGCAGAACTCCGGCCTGCAGTATTCCGGCCAGTCCGGCGGCATGAACGAGGCGTTCTCGGACATGGCAGGCGAAGCGGCCGAGTACTTCGACCGCGGCCACAACGACTGGCTGGTGGGCGCGGAGATCATCAAGAACGGCACCGCGCTGCGCTGGATGTGCACGCCGAAGCTGGACGGCGCCTCGATCGACAACGCGGCGAACTACACCAGCTCGCTGGACGTGCACTATTCCAGCGGTGTCTACAACAAGGCGTTCTGCACGCTGGCCAAGTCGTCCAACTGGAACACCAGGAAGGCCTTCGAAGTCTTCGCGCACGCCAACGCGATGTACTGGTCGGCCACCTCCACGTTCAACGCCGGTGCCTGCGGCGTGGAGAACGCGGCGGACGACTACGGCTACTCGCGCAGCGACGTGGTGGCGGCGTTCAATGCCGTCGGCGTGACCTGCCAGTAG
PROTEIN sequence
Length: 181
SMNFGDGASYFYPLTSLDVTSHEISHGFTEQNSGLQYSGQSGGMNEAFSDMAGEAAEYFDRGHNDWLVGAEIIKNGTALRWMCTPKLDGASIDNAANYTSSLDVHYSSGVYNKAFCTLAKSSNWNTRKAFEVFAHANAMYWSATSTFNAGACGVENAADDYGYSRSDVVAAFNAVGVTCQ*