ggKbase home page

scnpilot_solids2_trim150_scaffold_438_30

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(26361..27938)

Top 3 Functional Annotations

Value Algorithm Source
NERD domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNV5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 486.0
  • Bit_score: 834
  • Evalue 6.00e-239
  • rbh
NERD domain-containing protein {ECO:0000313|EMBL:EIM01147.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 486.0
  • Bit_score: 834
  • Evalue 8.40e-239
NERD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 520.0
  • Bit_score: 673
  • Evalue 7.30e-191
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1578
ATGAGAATGATCCCAAGTCAGCCGCTGGATACTCGAAGCCGGGCGGAGCTGCAAGTTTTCGACCAGTTACGTGCATGCTTTTCTGGAGCAGATCAGCATGGCTGGTTCGCCATGCATTCGCTCAATCTGCCGCAACATGAATACAAGCGCTTTGGTGAAATCGACTTCGTTGTTTGCGGGCCATGTGGCGTGTTCGTATTGGAAGTCAAAGGTGGCCGCGTATCCTGCCACGATGGTGTCTGGGAGACACAGAATCGCCATGGGAACATTGACCGCCTTGCGGAATCACCATTCCGGCAGGTCGAAGGCGCACTCCATGGTTTGCGGAAGAAACTGCCAGCCGAGCTAGCATCCGCCTTCGTCTTTGGGTATGCGGTAATCATGCCGGATGTGGGAGGTCTGCCCGAAAGTGCCGAATGGGATAGGGCGGTTCTCGCAGATGCCAGGAACTTTCGCGAGTTTGAGCATTGGCTGAAGAAATTGATTTCCCATTGGCGCAGCAAGGACAGGAACGACTCGAAGGCGAGCCCAGAGCAATTGCGCAGGCTGCAGCAGTTCATGCGCCCTGAGTTCGAGGCGGTGATGCCATTGCATGCATCGGCGCATGCGACCGAAGTGCGCATTGCTCAGCTGACCGAGGATCAGCTTCGATACATTGACGTCGTCGAAGCCAACGATCGCGTCATTTGTTCGGGGGGAGCCGGGACAGGAAAGACGATGCTGGCGCTGGAACTTGCCAAGCGTTGGAGCGCTGCTGGTATGAAGGTTGCTCTGACCTGCCACTCCCCGTGGCTCAAGACCTATCTTGAGAATGCCGCTACACCCGGGGTTACGGTGTCACTGGCAAACTCCGCTCCCGTCACCGCGAGGCGCGCCGGTATAGAAGTGTTTGATGCCCTGATCGTTGATGAAGGCCAGGACGTGCTGAATATGGATGCTTTGGAGCGCCTGGACAGTGTTCTGCGTGGCGGGCTTGATGGCGGTCGTTGGAGCTTCTTCCACGATGCAAATAATCAATCCGGGCTGTGCGGCGAATATCAGCCGGATGCCTACGAGTATCTTGCGGCTCTTGGCGCTGTCTGCATTCCATTGAAAACCAACTGTCGCAACTCGTTGCCCATCCTGGCGCGGGTGCAGAAGGCGCTCGACGCAGATGTAGGTGCGTCTGCTGTTGGGAATGGCCCTCCGGTGCGTGAGATAACGGTTGCCGGCAGGGAGGATGCCGCCGTCGCGTTGCACAACGAGTTGCTGAAACTGATCAATGACGAAGGCTTAAGCCCCTCAGATATCGTTATTCTGTCGCCAGAGACCTATTCGCAGTCTTGCGCGGCATTGATGCCGGAACATGCGGGGGTGCACGTTGCGGTACTGGATGCCTACTCTCCCCGAGGTGCTGGCAATGGCGCTATCGGTTTCGCGCAGATCGAGAGCTTCAAGGGGTTGGAAAGTTCAGTTGTATGGCTGGTCGACATGTGTGCTCCGAGCATGAAGTCCCCCTTGCGGTCATCGCACTATGTGGGAATGACCAGGGCACGCGCCCTGCTTGGAATGATCCACGTCGATCCACACGGGGGATGA
PROTEIN sequence
Length: 526
MRMIPSQPLDTRSRAELQVFDQLRACFSGADQHGWFAMHSLNLPQHEYKRFGEIDFVVCGPCGVFVLEVKGGRVSCHDGVWETQNRHGNIDRLAESPFRQVEGALHGLRKKLPAELASAFVFGYAVIMPDVGGLPESAEWDRAVLADARNFREFEHWLKKLISHWRSKDRNDSKASPEQLRRLQQFMRPEFEAVMPLHASAHATEVRIAQLTEDQLRYIDVVEANDRVICSGGAGTGKTMLALELAKRWSAAGMKVALTCHSPWLKTYLENAATPGVTVSLANSAPVTARRAGIEVFDALIVDEGQDVLNMDALERLDSVLRGGLDGGRWSFFHDANNQSGLCGEYQPDAYEYLAALGAVCIPLKTNCRNSLPILARVQKALDADVGASAVGNGPPVREITVAGREDAAVALHNELLKLINDEGLSPSDIVILSPETYSQSCAALMPEHAGVHVAVLDAYSPRGAGNGAIGFAQIESFKGLESSVVWLVDMCAPSMKSPLRSSHYVGMTRARALLGMIHVDPHGG*