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scnpilot_solids2_trim150_scaffold_438_41

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 45241..46098

Top 3 Functional Annotations

Value Algorithm Source
VirB8 protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXL7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 289.0
  • Bit_score: 409
  • Evalue 2.60e-111
  • rbh
VirB8 protein {ECO:0000313|EMBL:EIL91958.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 289.0
  • Bit_score: 409
  • Evalue 3.60e-111
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8); K03203 type IV secretion system protein VirB8 similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 289.0
  • Bit_score: 266
  • Evalue 1.10e-68

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGGCAGGGAAGAAGACATCCGGCACCGCGATCGAACGCAGTGTGGCGCAATCGACCCGGTTCGAACTGACCATTTCCGAGCTGGCGCAACGCAGCGAGCGTCGAGCGTGGTGGGTGGCCTGGACAGCCGTTGCGCTGGTGCTGGTCCTCTCCGGCGGCTACTACTTCATGCTGCCGCTCAAGCAGAAAGTTCCCTATCTGGTAATGGCCGATGCCTACACCGGCACCGCCACGGTAGCGCGGCTGGACGGCGACTTCGCCATGCGCGGGATCACCACGCGCGAAGCGGTCAACCGCAGCAACGTGGCGCATTTCGTGCTGGCGCGCGAGTCGTACGACCTGGAGCTGGTCAACCTGCGCGACTGGAAGACGGTACAGACGATGGCAGCAGCCGGCGTCAAGGCGCCCTACGTGCAGCTGTTCGCCAACAGCAATCCAGACAGCCTCATCAAGCAGTTCGGCAAGGACCAGGCGATCCGCATCAAGCTGCTGAGCATCCAGCTGGTCGGCGGCGGCCCCGGCAAGACGCCGCGCGGCGCCACCGTGCGGTTCCAGCGCAGCCTCTACAACAAGCAGAACGGGGCGACCCGTCCGCTGGACAACAAGATCGCCACCATCGCGTTCACCTACAAGCAGAACCTGGAGATGGACGATCAGAGCCGGGTCGAGAACCCGCTGGGCTTCTGGGTCACCAGCTACCGGGTGGACGACGACTACGCCACCGCGCCGCCGCCGGAGGTATCCGTACCGCCGGTGATGACGCAGCCGGCACCGGCCATGGCCGCCACGCCCGCGCCTGCACCGACACCACCGGCTGCCGCTGCTACCGACACTCTCCCTGGAGCAGGTTCCCGATGA
PROTEIN sequence
Length: 286
MAGKKTSGTAIERSVAQSTRFELTISELAQRSERRAWWVAWTAVALVLVLSGGYYFMLPLKQKVPYLVMADAYTGTATVARLDGDFAMRGITTREAVNRSNVAHFVLARESYDLELVNLRDWKTVQTMAAAGVKAPYVQLFANSNPDSLIKQFGKDQAIRIKLLSIQLVGGGPGKTPRGATVRFQRSLYNKQNGATRPLDNKIATIAFTYKQNLEMDDQSRVENPLGFWVTSYRVDDDYATAPPPEVSVPPVMTQPAPAMAATPAPAPTPPAAAATDTLPGAGSR*