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scnpilot_solids2_trim150_scaffold_1833_7

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(6394..7650)

Top 3 Functional Annotations

Value Algorithm Source
MscS mechanosensitive ion channel n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W350_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 409.0
  • Bit_score: 642
  • Evalue 3.50e-181
MscS mechanosensitive ion channel {ECO:0000313|EMBL:EIL93891.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 409.0
  • Bit_score: 642
  • Evalue 4.90e-181
putative mechanosensitive ion channel forming protein similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 405.0
  • Bit_score: 451
  • Evalue 3.60e-124

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCAGACCTTGCAGAACTTTCTCGACCTTCCCTGGATGCGCACCGCGCTGGGCGTCATCGCGCTGCTGGCGCTGGCCTGGCTTGCCGGTCAACTGGCGCAGCGACTGCTGCTGCGCGTGGTGCGCGGCATCGCCCGGCGCACGACCTGGAAATGGGATGACGCCCTGTTCCGGCGCCACACCTTCCAGTGGCTGGCGCGGATGGTGCCGGCACTGGCGATCCAGTACGGCATCATGCTGGTGCCGGGCGTATCGCCTCGTATCGAGGCGCTGGTCGGCAACCTGATGACGGCGTTGCTGGTGTTCTTCGTGGTGATGGCGATCAGTGCCGCGCTGTCGGCGCTGGAGGATCTCTACCGGGAGACCCCGCGCGGGCAGCAGCGATCGATCAAGGGCCTGGTGCAACTGGTGAAGCTCGGCCTGTTCGTCGTTGCCGGATTGATCATCATCGCGGCGGTCACCGGCAAGCACATTGGCCTGCTGCTGTCCGGGCTGGGCGCGATGTCGGCGGTGCTGATGCTGATCTTCAAGGACACCATCCTGGGCTTCGTGGCCGGCGTGCAGTTGTCGTCGAACGACATGCTGCGGGTCGGCGACTGGATCGAGATGCCGCAGCTCAATGCCGATGGCGACGTGATCGACATCGCGCTGCACACGGTCAAGGTGCGCAACTGGGACAAGACCATCACCAGCATCCCCAGCTGGCGCCTGATCAGCGACTCGTACAAGAACTGGCGCGGCATGCAGGAGACGGGCGGGCGGCGGATCAAGCGTGCGCTGTATATCGATGCGGCCAGCGTGCGCTTTCTCGATGCGGACACGCTGGGGCGGCTGGCCGAGTTGCGCCTGCTGGCCGACTACCTGCCCTCCAGGCAGCAGGAAGTGGCGCGGTGGAACGCAGCACTCGGCGAGGCCGGCGAAGTGGCCGGCAATCGTCGCCGGCTCACCAACCTGGGCACCTTCCGCGCCTATGCGCAGGCCTACCTCGACACTCATCCGGAAATCCACCACGGGCTGTTCTGCCTGGTGCGCCAGCTCGCCAGCGGCCCGCAGGGCATTCCGCTGGAGCTGTATTGCTTCACCGCCAGCGTGGCCTGGGCGGACTACGAGAACACCCAGAGCGATATCTTCGACCACCTGTTTGCGCTCCTGCCCGAGTTCGGCCTGGCGCTGTACCAGCAGCCGTCGGGGCAGGACGTGCGCGCCGCGCTGGCGTACCGGCAGGAACAGTCGCTACGCCTGGCGGCGGGTGGTTGA
PROTEIN sequence
Length: 419
MQTLQNFLDLPWMRTALGVIALLALAWLAGQLAQRLLLRVVRGIARRTTWKWDDALFRRHTFQWLARMVPALAIQYGIMLVPGVSPRIEALVGNLMTALLVFFVVMAISAALSALEDLYRETPRGQQRSIKGLVQLVKLGLFVVAGLIIIAAVTGKHIGLLLSGLGAMSAVLMLIFKDTILGFVAGVQLSSNDMLRVGDWIEMPQLNADGDVIDIALHTVKVRNWDKTITSIPSWRLISDSYKNWRGMQETGGRRIKRALYIDAASVRFLDADTLGRLAELRLLADYLPSRQQEVARWNAALGEAGEVAGNRRRLTNLGTFRAYAQAYLDTHPEIHHGLFCLVRQLASGPQGIPLELYCFTASVAWADYENTQSDIFDHLFALLPEFGLALYQQPSGQDVRAALAYRQEQSLRLAAGG*