ggKbase home page

scnpilot_solids2_trim150_scaffold_2285_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 3204..4487

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase, phage integrase family n=1 Tax=Pseudomonas chlororaphis O6 RepID=I4XZ96_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 418.0
  • Bit_score: 558
  • Evalue 5.20e-156
  • rbh
Integrase/recombinase {ECO:0000313|EMBL:EBA00649.1}; TaxID=270374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. ELB17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 419.0
  • Bit_score: 459
  • Evalue 4.60e-126
integrase/recombinase similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 423.0
  • Bit_score: 356
  • Evalue 1.60e-95
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Marinobacter sp. ELB17 → Marinobacter → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGGCAACCCTTGAGACAATCCGGCACGTCCCACATCGGGACGAGATCAACAACGATCGCGTGGAATGGGTAAAAGCCAAGGGCCGGAAGGTGATAGAACGCCTTCCCCAGATCGTATGGATGGACCACACCCCTTGGCGTGAGGCCAACCTGTGGGCCTTGGAGCAAGCGACTTCCAACCGTAAGAACCTCAAGACTGTCGCCTCGGCTATAACTGGCATCCACGCTTATTCGAAGTGGCTTGAGAAAGAGGAGGTCAACTGGTGGGACTTTCCCGCACGAGAGGCGGACCGATGCCTGGTTCGCTATCGTGGTGCGTTGATTGATGCAAGGGATGGGGGTGAGCTTGCACCCTCTACCGCACAGCAGCGCATGGCTGTAGTTATTCGGTTCTATCGCTGGCTCTGGGCCTCGCGATTGATCTCGCCAGAGTGGCCCATGTGGCGGGACAAGCAGGTCGGCGTCCGGATCGCCGACACGTTTGGGTTCGAAAGAACGTTGATGATGAGGAGCACCGACCTTGCCATTCCAAATCGCAAGGCAATCGGGGATGGTCTCGAGGACGGCCTTCTTCCCGTGTCGATAGCTAACCGCAACGTCGTACTCGCCTTTGCGAACGACTATGCAAGTGAAGAACTGGCGCTGATGCTCCGCCTTGGCTTTCGTACCGGGATGCGGCTAGGAACAATTACCGACCTCAAGATTGGCTCACTGGAACGCGCCGTTCCTGATCCTTCGTTTCCCATGTGGTATCGCTTAGCGGTAGGTCCCGGCGCTCATCCTCCGGTGCACACGAAGTTCAGTGTGACCGGCCAAATTTGGATTGAGGCAAGCGATTTGCAGATGCTGAAGGACTACGCTTTTAGTTCTCGTCGTTTGAAGCGGCAGGCGCTCGCCAAGCCAGAGTGCCGGGGGAACTTATTCCTTACTCGTTTTGGTGGCCGATACGGGGCAGGAGGTGCCGATATGAGCCGCTCGCTCAATGTCGAGATTGGTAGATTGCGCAACAAAGGCTTCGCAGCTGGCCATAGCGTCTTTCGTACGTTCCACTTCCACCAATCTCGATGCACCTTTGCCACAGAATTAGCCCGCGTAGCGATTCGGCACGGTGGCGTGAATGTGGCTATCCAATTGGTGAAACAGGCTCTACTGCACAAAGACGAAAATACCACGATCAAATACATCCGCTTTGTCGAAAAAAGCGCCGTCATGGCCGAGGCAGCCGACGCATTTACCCAGAGTTTCCTGGGGCTGTTTGATACCAGGAAGGCCGCGAATGCTTGA
PROTEIN sequence
Length: 428
MATLETIRHVPHRDEINNDRVEWVKAKGRKVIERLPQIVWMDHTPWREANLWALEQATSNRKNLKTVASAITGIHAYSKWLEKEEVNWWDFPAREADRCLVRYRGALIDARDGGELAPSTAQQRMAVVIRFYRWLWASRLISPEWPMWRDKQVGVRIADTFGFERTLMMRSTDLAIPNRKAIGDGLEDGLLPVSIANRNVVLAFANDYASEELALMLRLGFRTGMRLGTITDLKIGSLERAVPDPSFPMWYRLAVGPGAHPPVHTKFSVTGQIWIEASDLQMLKDYAFSSRRLKRQALAKPECRGNLFLTRFGGRYGAGGADMSRSLNVEIGRLRNKGFAAGHSVFRTFHFHQSRCTFATELARVAIRHGGVNVAIQLVKQALLHKDENTTIKYIRFVEKSAVMAEAADAFTQSFLGLFDTRKAANA*