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scnpilot_solids2_trim150_scaffold_2009_4

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 1223..1696

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115 similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 156.0
  • Bit_score: 289
  • Evalue 4.00e-75
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 157.0
  • Bit_score: 284
  • Evalue 2.20e-74
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK62_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 156.0
  • Bit_score: 289
  • Evalue 2.80e-75

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGAGGATAGGCAGCGGTTTCGACGTGCACGCGTTCGGCGAGGGTGACCACCTCGTGCTCGGTGGCGTGCGCGTGCCGCACGATCGCGGCGTGGTGGCGCACTCCGACGGCGACGTGGTGATCCACGCGCTGTGCGACGCCATCTTCGGCGCGCTGGCACTGGGCGACATCGGCCGTCATTTCCCGCCCACCGACGCACGCTGGCGCGGCGCCGACAGCCGCCAGTTCCTGCGCCATGCGGCAATGCTGATGGTGCAGCACGGCTACGCCTTGGGCAACGCCGATGTCACCGTGATCGGGGAGGCACCGAAGGTCGGTCCGCATGCGCGGGCGATGCGCGAAATTCTCGCTGCCGACCTGGCCTGCGACATCGATTGCGTCAGCATCAAGGCCACCACCACCGAAAGGCTCGGTTTCTGCGGCCGCGGCGAGGGCATCGCCGCGCAGGCGTGCGTGCTGCTGGAGCGCGCATGA
PROTEIN sequence
Length: 158
MRIGSGFDVHAFGEGDHLVLGGVRVPHDRGVVAHSDGDVVIHALCDAIFGALALGDIGRHFPPTDARWRGADSRQFLRHAAMLMVQHGYALGNADVTVIGEAPKVGPHARAMREILAADLACDIDCVSIKATTTERLGFCGRGEGIAAQACVLLERA*