ggKbase home page

scnpilot_solids2_trim150_scaffold_1759_7

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(8765..9784)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC42_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 335.0
  • Bit_score: 490
  • Evalue 1.10e-135
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL97033.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 335.0
  • Bit_score: 490
  • Evalue 1.50e-135
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 334.0
  • Bit_score: 420
  • Evalue 5.50e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGGCGGCAGCAACCATCAAAGACGTGGCGCGCGAGGCCCGGGTGTCGGTGGCTTCAGTGTCGCGCGCGCTCAATGGCGGCGGTGGCGTCACCGCGGCCACCAGCGCGCGCATCCACGCCGCCGCCGAGCGCCTGCAGTACATCCCGCATGCAGCGGCGCGCATGCTGATCACCCGCCGCACGCACACTGTCGGCGCCCTGCTGCCCGACCTGTACGGCGAGTTCTTTTCCGAATTGATCCGCGGCATCGACCTGGCGGCGCGTGCGCGCGGCCTGCACCTGCTGGTATCCAGCTCGCACGGTGGCGCGACCGAAGCGGCGGCGGCGGTGCGCTCGATGCAGGGTCGCGTCGACGGCCTGCTGATCCTGTCCGAACGGGTCGACACGGCGTTCCTGCGCGCCAACCTGCCCAAGGCGCTGCCGGTGGTGCTGCTCAACAGCGCGGTGAGCGGGCCGGCGTTCCACGTGATCAACATCGACAACCACGGCGGTGCGGTGGCGATGGTGCGGCACCTGCTGCAGGCCGGCCATCGCAGCGTGGCGCTGATCGCCGGGCCGCCCGGCAACTTCGACGCCAGCGAACGCGAGCGCGGCTATCGCGAGGCGATGGCCAGATACGCCCCGCGCGCGGCATTGACCGTGGTGGATGGCGACTTCACCGAGGAATCGGGCTATCGCGCCGGCCAGCAGCTGCTGGCGCGGACGAAGCGGCCGGCGGCCGTGTTCGCCGCCAACGACATGATGGCGGTGGGCTGCCTGGCGGCGTTCAAGGACGCCGGCGTGCAGGTGCCGGAGGACATCGCGCTGGCCGGCTTCGACGATATCCCGATCACCCGCTACGTGACACCGGCCCTGACCACGGTGCGCGTGCGCATTGCCGACTTCGGCCGTCTCGCGCTGGAGCGCCTGGCCGACGTCGTCGAACGCCCCGGGCAGGAAACACCTTCCGCCGACACGCTCGGTTTTGAAATCGTGGTTCGCGACACCTGCGGCGGAAACAAACCAGAAAAGAACTCCTGA
PROTEIN sequence
Length: 340
MAAATIKDVAREARVSVASVSRALNGGGGVTAATSARIHAAAERLQYIPHAAARMLITRRTHTVGALLPDLYGEFFSELIRGIDLAARARGLHLLVSSSHGGATEAAAAVRSMQGRVDGLLILSERVDTAFLRANLPKALPVVLLNSAVSGPAFHVINIDNHGGAVAMVRHLLQAGHRSVALIAGPPGNFDASERERGYREAMARYAPRAALTVVDGDFTEESGYRAGQQLLARTKRPAAVFAANDMMAVGCLAAFKDAGVQVPEDIALAGFDDIPITRYVTPALTTVRVRIADFGRLALERLADVVERPGQETPSADTLGFEIVVRDTCGGNKPEKNS*