ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_1554_3

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(1772..2878)

Top 3 Functional Annotations

Value Algorithm Source
Amidohydrolase 2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WW43_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 372.0
  • Bit_score: 623
  • Evalue 1.10e-175
  • rbh
Amidohydrolase 2 {ECO:0000313|EMBL:EIM00927.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 364.0
  • Bit_score: 618
  • Evalue 5.10e-174
Amidohydrolase similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 372.0
  • Bit_score: 615
  • Evalue 9.70e-174
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGAACACGATCTTCCGTCCCGCCGTCCTTGCCCTGTTGGCCATCGCGGCAGCCCTTTCCAGCGCCTGCGCGACGGCGAGCCGGCATGCCGCGGAAAGTTATTCGATGGCCGACTTCGGCCAGGTGCGCAAGTTCGACGCCCACGTCCACGCCAACACGCCCGATCCGGCATTCCTCGAACAGGCGCGCGCGGACGGTTTCGAGTTGCTGTCGATCAACGTCGACTACCCCGACTTCCCGAGCATCGCGCGGCAGCACGCGGCCGCCGTGGCCCTGGCGGCAAGGGACCCGGCGCATTTCCACTGGGCCACCACCTTCTCGATGAAGGGGTTCGGCACGCCGGGCTGGACCGAACGCGTCGACGCGAAACTTGCCCGCGACGTGGCGGCGGGCGCCCTGGCAGTGAAGATCTGGAAAAACGTGGGCCTCGCGGAGCGGAGCGCCGACGGCAAACTGATCATGCTCGACGATCCGGGCCTGGCGCCCGTGGCCGAGCAGGTGCGCGCGCTCGGCGTGGCCCTGATCGACCACCAGGGCGAGCCGCGCAACTGCTGGTTGCCGCTGGACCAGATGACCACCGACAACGACCGCGAGTACTTCAGCAAGCATCCGGAGTACTACATGCACCTGCATCCGGAGATGCCGCGCTACGAGGATCTGATGGCGGTGCGCGACCGCTTCGTGGCCGCGCACCCGAAGCTGCGCTTCGTCGGCGCGCACCTGGCCAGCCTGGAGTATGACGTCGACCGCATCGCCGCCTTCCTCGACCGTTTTCCCGATGCCACCGTGGACATGGCCGCGCGCATGAGCCAGGTGCAATACCAGTCGGTGCGCGACCGCGAGAAGGTGCGCAACTTCTTCATCCGCTACCAGGATCGGGTGATGTACGGCACCGACCTGACCTACGGCCCCGATGCCGACCCCGCCGAGTTCCGCCGCGAGGCGCACGCGGCGTGGAGCTCCGACTGGCGCTACCTGGCCACCGGCGAGACGCAGCACGTGGACATGATCCACGCCGACGTGCCGGGCCTGGCGCTGCCGCGCGCGGTGATCGACAAGATCTACTACGGCAATGCGATGCGCGTGTTCGTCAGGCCGGGCACCTAG
PROTEIN sequence
Length: 369
MNTIFRPAVLALLAIAAALSSACATASRHAAESYSMADFGQVRKFDAHVHANTPDPAFLEQARADGFELLSINVDYPDFPSIARQHAAAVALAARDPAHFHWATTFSMKGFGTPGWTERVDAKLARDVAAGALAVKIWKNVGLAERSADGKLIMLDDPGLAPVAEQVRALGVALIDHQGEPRNCWLPLDQMTTDNDREYFSKHPEYYMHLHPEMPRYEDLMAVRDRFVAAHPKLRFVGAHLASLEYDVDRIAAFLDRFPDATVDMAARMSQVQYQSVRDREKVRNFFIRYQDRVMYGTDLTYGPDADPAEFRREAHAAWSSDWRYLATGETQHVDMIHADVPGLALPRAVIDKIYYGNAMRVFVRPGT*