ggKbase home page

scnpilot_solids2_trim150_scaffold_1312_3

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(3167..4222)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 351.0
  • Bit_score: 605
  • Evalue 4.30e-170
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1R3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 351.0
  • Bit_score: 605
  • Evalue 3.00e-170
ribosome small subunit-dependent GTPase A similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 351.0
  • Bit_score: 599
  • Evalue 5.20e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGAGTGATGTCGAAACGATCGAGCGGCTGCGGCATATCGGCTGGCGCGGCGACCGCCTGCCGGCCGGCGGCCTGCGCCTGGCGCGGGTGGTGGCGCAGCATCGCGCCGGTTATGAACTGCACGATGGCCACGCACTGTTCGGCGCGCAGCCGGACGGCCGCTTCCTCAAGCGCGGCATCGACCCCGCCGAGCGACCGGTGGTGGGCGATTTCGTGGAGGTGGCCGACGGCACGCCGCCGCACATCGTCAGCGTGGGAGCGCGCCGCAGCATGTTGTCGCGCGCCGCCGCGGGCGAGCGCTACGAGCGCCAGCTGATCGCCACCAATGTCGACTACGTGCTGGTGCTGACCGGGCTGGACGGCGACTTCAACCCCGCCCGCATCGAGCGCTACCTGTCGCTGACCGAAGGCTCCGGCGCGCAGCCGGTGGTGCTGCTGAGCAAGCTGGACAAGCACGAGGATGCGGCGGCGAAGGTCGCCGCGCTGCGCGCGCGCCTGCCGCAGGACACGCCGATCCATGCGCTCAACTGCAAGGACCCCGCCAGCGCGCAGGAGCTGGCGCGCTACCTGCAGCCGGGTGACAGCGCGGTGCTGGTGGGCTCCTCCGGCGCCGGCAAATCGACGTTGACGAATACCTTGTTCGGCACCGCGACCATGGCCACCGCCGCCGTGCGCAGCCACGACAGCCGCGGTCGCCACACCACCACCCACCGCGCGCTGCTGCAGTTGCCTTCGGGCGGTTGCCTGATCGACACCCCCGGCATGCGCGAGCTGAAACTGACCGGCGAGGAGCAGCTCGACCTGTTCGCCGACATCGAGGCGCTCGCCGAGCAGTGCCGCTTCGCCGATTGCGGCCACGGCAGCGAGCCCGGTTGCGCGGTGCAGGTGGCGCTGGACACCGGCGAGCTGAGCGCCGAGCGCTGGCGCAGTTATCTCAAGCTGCACGACGAGCGGGAGGAACAGGCTGCCACCCTCGAAGCGCGATTGCGCCGTCAGCGCGGCGGCCGCCCGCTGGAGCCGCCGCGCGGCCACCGCGTCAAGCGCGAGCGGGAGTAG
PROTEIN sequence
Length: 352
MSDVETIERLRHIGWRGDRLPAGGLRLARVVAQHRAGYELHDGHALFGAQPDGRFLKRGIDPAERPVVGDFVEVADGTPPHIVSVGARRSMLSRAAAGERYERQLIATNVDYVLVLTGLDGDFNPARIERYLSLTEGSGAQPVVLLSKLDKHEDAAAKVAALRARLPQDTPIHALNCKDPASAQELARYLQPGDSAVLVGSSGAGKSTLTNTLFGTATMATAAVRSHDSRGRHTTTHRALLQLPSGGCLIDTPGMRELKLTGEEQLDLFADIEALAEQCRFADCGHGSEPGCAVQVALDTGELSAERWRSYLKLHDEREEQAATLEARLRRQRGGRPLEPPRGHRVKRERE*