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scnpilot_solids2_trim150_scaffold_1316_25

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(21806..22867)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W475_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 353.0
  • Bit_score: 557
  • Evalue 1.20e-155
Ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:EIL94266.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 353.0
  • Bit_score: 557
  • Evalue 1.70e-155
16S RNA G1207 methylase RsmC similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 354.0
  • Bit_score: 553
  • Evalue 4.30e-155

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGGCGGGAGTATTCGCGACCCCCAGCGCAGCGCTGGCGGCGTTGTTCGTGCCGTTCGAGACGGCGCGGTTGAGTTTGCCCGCGGATGGCCGGGTGCTGTTCTTGCGTGCGCGCGCCAATGTGCGCCTGCGCGAGCTGGCGCAGCCGGGCTGGTTGTGCGAGCAGGGTTTCCTGCCATTCGCGGAGGAGCTGGCGCGACAGGGCCTGCACGTCGGCGAACCGGCGGCCGACGAACGTTTCGCGCTGGTGCTGGTGCTGCCGCCGCGCCAGCGCGACGAGGCGCGCGCGCTGTTCGCCCGGGCGCTGCAGCACACCGCACCGGGCGGCACCGTGCTGGCGGCAATGGCCAATGCCGAGGGTGCGAAATCCGGTGAGGCGGATCTGCAGAGGCTCGCCGGCCCCGTGCAGCAACTGTCCAAGCACAAATGCCGCGTGTTCTGGGCCGCGCGGGACGACGCTGCCATCGACCAGGCGTTGCTGAAGCCATGGCTGGCACTGGATGCACCACGCGAGATTGCCGGCGGCTACGTCAGCCGGCCGGGGCTGTTCGCCTGGGACCGCGTCGACCGCGCCTCGGCGCTGCTGGCCGAACACCTGCCGGTGGAGCTGCACGGTCGGGTGGCGGACCTCGGCGCCGGTTACGGTTACCTCGCCTGCCAGCTGATCGCGCGTTGCCCGCGGGTCTCGGCGATCGACCTGTACGAGGCCGAGGCGCGCGCGCTGGAGCCGGCGCGCGTCAACCTGGCGCGGGCACAACGCGATGCTGGTCGCGAGCTGGCGGTGAACGTGCACTGGCACGACGTGACCCGCGGCTTGCCCGAACGCTACGATGCCATCGTCAGCAATCCGCCATTCCACCAGGGCCGCGCGGACCTGCCGGAGCTGGGCCGCGCCTTCATCACCAGTGCAGCGGATGCGCTGCGACCGGACGGCTGCCTGCTGCTGGTGGCGAATCGGCATCTGCCGTACGAGGCGCACCTGGGCCAGCGCTTCGAGACCGTGCGCACGCTGGCGACGCAGGAAGGATTCAAGGTGATCGAGGCCACCGGAGTACACGCATGA
PROTEIN sequence
Length: 354
MAGVFATPSAALAALFVPFETARLSLPADGRVLFLRARANVRLRELAQPGWLCEQGFLPFAEELARQGLHVGEPAADERFALVLVLPPRQRDEARALFARALQHTAPGGTVLAAMANAEGAKSGEADLQRLAGPVQQLSKHKCRVFWAARDDAAIDQALLKPWLALDAPREIAGGYVSRPGLFAWDRVDRASALLAEHLPVELHGRVADLGAGYGYLACQLIARCPRVSAIDLYEAEARALEPARVNLARAQRDAGRELAVNVHWHDVTRGLPERYDAIVSNPPFHQGRADLPELGRAFITSAADALRPDGCLLLVANRHLPYEAHLGQRFETVRTLATQEGFKVIEATGVHA*