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scnpilot_solids2_trim150_scaffold_3320_10

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 8605..9765

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CAA07 similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 392.0
  • Bit_score: 520
  • Evalue 1.80e-144
Type I secretion protein TolC {ECO:0000313|EMBL:KJV26863.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 393.0
  • Bit_score: 411
  • Evalue 9.90e-112
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 390.0
  • Bit_score: 329
  • Evalue 1.10e-87

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Taxonomy

Luteibacter yeojuensis → Luteibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGCAATTGAAGCTGCTCACCCTGGCCCTGGCGCTGGCCGCCGTCTCGCTGCCCAGCCATGGCGAGGATCTGCTCGATGCCTATCGCGACGCGCGCGCCAATGACCCGGTACTGGCCCAGGCCGACGCGACGCGGCTGGCCACCGGCGAAGGCGTGCCGCAGGCGCGTGCCGGGCTGCTGCCGCAGATCGACGGTTCACTCACCCTGCAACAGGCCAACGGCGGCCAGGGCAGCAACAGCCTGGACTTCGGTACCGGCGCCAACAGCTTCCTGTGCAGCGGCATCGCCGCCGGCAGCGGCAACTACACCTGTACCGGCCCGCTGGCGTCCAACGGCACCGCCTCCGACGGCGGCCACCTGCGCACGCGCAGCCTCAATGCCACGCTGACCCAGACCGTTTTCGACTTCAGCAAGTACGCCAACCTCAAGGCCGCGCACTCCGCCAAGGATGCGCAGGACGCGACCTACCAGGCCGCAGCGCAGGACCTGCTGGTGCGCGTCACCGCGGCGTACTTCACCGTGCTCAACGACGAGGATCAGCTGACCTTCGCCAAGGCCAACGAGGACGCGTTCAAGCGCCAGTACGACCAGGCCGACCAGCAGTACAAGGTGGGTCTGTCGGCGATCACCAACGTGTACCAGGCCAAGGCCTATTACGAGAACGCCAAGACCCAGACCATCGCGGCGCAGAACACGCTCGACAACGACCGCGAAGCCTTGCGCGTCATCACCGGCAAGCCGGTGGGCGAACTCAAGAAGCTGCGCGACGACCTGCCGATGGACGCGCCCGCGCCGAGCGATCCGCAGGCCTGGGTGAAGCAGGCGCTGGAGAACAACCCGACCTTGCAGGCGCAGCAGGACAACGTGCGGACCGCCGAGCACAACATCACCGCGGCACGCTCGGGCCACCTGCCCACGATCAGCGCCAGCGTGAACTACGGCAAGAGCAGCAGCTGGTACCAGGACCCCGCGCGCATCGGTTCGGAGCGGCCGGCCTCGACCACCATCGGGCTGACCTTGAACGTGCCGATCTTTTCCGGCGGTTACACCCAGTCGCGCGTGCGCCAGTCGATCTACCAGCGCGATGCCGCCAACGACGCACTGGAACTGCAGCGCCGCCAGGTGATCCAGAACACGCTCAACTACTACCGCTCGGTGCTC
PROTEIN sequence
Length: 387
MQLKLLTLALALAAVSLPSHGEDLLDAYRDARANDPVLAQADATRLATGEGVPQARAGLLPQIDGSLTLQQANGGQGSNSLDFGTGANSFLCSGIAAGSGNYTCTGPLASNGTASDGGHLRTRSLNATLTQTVFDFSKYANLKAAHSAKDAQDATYQAAAQDLLVRVTAAYFTVLNDEDQLTFAKANEDAFKRQYDQADQQYKVGLSAITNVYQAKAYYENAKTQTIAAQNTLDNDREALRVITGKPVGELKKLRDDLPMDAPAPSDPQAWVKQALENNPTLQAQQDNVRTAEHNITAARSGHLPTISASVNYGKSSSWYQDPARIGSERPASTTIGLTLNVPIFSGGYTQSRVRQSIYQRDAANDALELQRRQVIQNTLNYYRSVL