ggKbase home page

scnpilot_solids2_trim150_scaffold_4862_10

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(9443..9781)

Top 3 Functional Annotations

Value Algorithm Source
Competence protein ComEA-like protein with helix-hairpin-helix repeat region n=1 Tax=Rhodanobacter denitrificans RepID=M4NF81_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 117.0
  • Bit_score: 160
  • Evalue 1.10e-36
competence protein ComEA-like protein with helix-hairpin-helix repeat region similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 117.0
  • Bit_score: 160
  • Evalue 3.40e-37
Competence protein ComEA-like protein with helix-hairpin-helix repeat region {ECO:0000313|EMBL:AGG88263.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 117.0
  • Bit_score: 160
  • Evalue 1.50e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGTTCCACAAGCTCGCCGCCATCACCCTCGCGCTGGGCCTCGCCGCCCCGGGGCTGCTGTTCGCCGCCACGCCGGTCAACATCAACAAGGCCGATGCCAAGGTCATCGCCAAATCGCTCGACGGGATCGGCGCGACCCGCGCCGAGGCCATCGTGGCCTGGCGCGAGGCGCACGGCCCGTTCAAGAAGGCCGACGACCTGAAACATGTCAAGGGCATCGGCAAGGCCACGATCGAGCGCAACCGCAGCGCGATCCTGTTCGCCGACGACGGCGCCGCCGGCAGCGACACCGCCGCCGTACCCAAGCCGCGACGCGGCAAGGCGGCCGCCAGCGAGTAA
PROTEIN sequence
Length: 113
MFHKLAAITLALGLAAPGLLFAATPVNINKADAKVIAKSLDGIGATRAEAIVAWREAHGPFKKADDLKHVKGIGKATIERNRSAILFADDGAAGSDTAAVPKPRRGKAAASE*