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scnpilot_solids2_trim150_scaffold_4886_7

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(6731..7600)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W796_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 289.0
  • Bit_score: 525
  • Evalue 3.30e-146
  • rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL95337.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 289.0
  • Bit_score: 525
  • Evalue 4.60e-146
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 272.0
  • Bit_score: 166
  • Evalue 1.20e-38

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGGGTGCCTCCCGTCTCACCGTGCTGTTCGACAGTCCGCTGCTGCGGATCACCGACATCGACTGCAGCCACCCGCGCGGTGGTTGCGGCGGCGAACGCGGCGACGAGCGCACTCACCTGGTACTGCTGCGGCGTGGCGGCTTCGGTTATCACCTGCGCGGGGCGGAATACGTGGGCGACCCCGCCACCGCCCTGCTCTACCGCGCCGGCGACAGTTACCGCATCTCGCACCCGTTCGAGGGCGGCGACGCCGGCAGCTGTTTCGAGGTGGCGCCCGCGCACGAGGAGGCGCTGTTCGGCCGGCGCCTGCGCGGGTCGGCCGACGCGGCGCGACCGGTCGAAGCCGTCGACCAGTACCGGCATCGTGCGCTCCACGCGGCGCTCGCCCACGACGGGCGCGACAGGCTGCGGGTGGAGGAGGCGGCCGCCGTACTGTGCACCGCGGTGCTTCGGCACGATGCTGCAGCGAGCATCGCGCCGCTGTCCGCAACCACCCGGCGTCGACTTGGCCGGGTGCGGGAAGTGCTGCTGGCCGATCCGACCGCAGACGTCGGACTGGCCGAACTCGCCACCCATGCCGGTTGCTCGCCGTTCCACCTTTCGCGCCTGTTTCGCCGCGCCTGCGGCAGCAGCCTGGTCGTCTACCGCACGCGCTTGCGCATCGCGCTCGCACTCGACCGCCTCGCCCACGGCGCGGACAATCTCGCCGCACTGGCCAGCGAGCTGGGCTTCAGTCATCAGAGCCACTTCGGCGCGATTTTCCGACGACATGTCGGACTGACCCCGCGTGCCGCGCGCGAGACCCTGCGTCCGTCGGCGCTGGCCCGCACGGGCAAGAATTTGATAGCGGCACACCGGCCGGAGTCCTAG
PROTEIN sequence
Length: 290
MGASRLTVLFDSPLLRITDIDCSHPRGGCGGERGDERTHLVLLRRGGFGYHLRGAEYVGDPATALLYRAGDSYRISHPFEGGDAGSCFEVAPAHEEALFGRRLRGSADAARPVEAVDQYRHRALHAALAHDGRDRLRVEEAAAVLCTAVLRHDAAASIAPLSATTRRRLGRVREVLLADPTADVGLAELATHAGCSPFHLSRLFRRACGSSLVVYRTRLRIALALDRLAHGADNLAALASELGFSHQSHFGAIFRRHVGLTPRAARETLRPSALARTGKNLIAAHRPES*