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scnpilot_solids2_trim150_scaffold_2729_11

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 9725..10546

Top 3 Functional Annotations

Value Algorithm Source
LysM domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 250.0
  • Bit_score: 462
  • Evalue 4.20e-127
LysM domain-containing protein {ECO:0000313|EMBL:EIL98620.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 250.0
  • Bit_score: 462
  • Evalue 5.90e-127
LysM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 258.0
  • Bit_score: 461
  • Evalue 2.30e-127

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGATCAGAAAGACAATCGTGTTGCTGGCCGGCATGCTGGTCACCCTGACCGTCTATGCCGCGGGCGCGCAATTGCGTGCCAATCACCCCGACAGCTACACCGTTCGCCGTGGCGACACGTTGTGGGACATCTCCGCCAAATTCCTGGCCAAGCCGTGGTTGTGGCCGGAGATCTGGCAGGCCAACCCGCAGGTGCGCAATCCCCACCTGATCTATCCCGGCGACGTGCTCAACCTGTCCTTCATCAACGGCCCGAGCCTGCGGCTGGAGCCCGGCGTGCATCGCGAAGGCGAGGCGGTGCCGGCGATTCCGCTCAGCCAGCTGAAGATGTTCCTGAAAGACATGCGGGTGATGGATTCCAACGCGGTCAGCTCCGCGCCCTACGTGGTCGGCCTGGAAGAGAACCGCCTGCGCGGCGCCGTCGGCCAGAACCTTTACGTGCGCGGCTTGCAGGGCGAGCCGGGCCAGCGCTGGGCGATCGTGCGGCCCAGCCACGTGTTCCGCGGCTTCGACCAGAACGATCCGGCCGATGCCGACCTGGTGGCGCACGGCCTGGACAGCAACGCGGCAATGGTCAATGCGCCGTGGCGCGAGGATTCGCGCAACGACGGCCACTATGGCAAGGGCGACGACCTCGGCGTCGAGGTGACGGTGATCGGCACCGCCGAGACCCTGCGCACCGGTGATCCGGCCACCCTGCTGCTGCTCGACTCCACCCGCGAGATCCGCAGCGGCGACACAACGGCACCACGTTCTCGATCTTCGAGCCCGGCGAGACCATCCACGACGATGTGGCCAGCAACAGCTGGAACCGCGGCGTAG
PROTEIN sequence
Length: 274
MIRKTIVLLAGMLVTLTVYAAGAQLRANHPDSYTVRRGDTLWDISAKFLAKPWLWPEIWQANPQVRNPHLIYPGDVLNLSFINGPSLRLEPGVHREGEAVPAIPLSQLKMFLKDMRVMDSNAVSSAPYVVGLEENRLRGAVGQNLYVRGLQGEPGQRWAIVRPSHVFRGFDQNDPADADLVAHGLDSNAAMVNAPWREDSRNDGHYGKGDDLGVEVTVIGTAETLRTGDPATLLLLDSTREIRSGDTTAPRSRSSSPARPSTTMWPATAGTAA*