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scnpilot_solids2_trim150_scaffold_6369_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(981..1538)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 185.0
  • Bit_score: 289
  • Evalue 2.70e-75
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 175.0
  • Bit_score: 286
  • Evalue 5.20e-75
Shikimate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ54_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 185.0
  • Bit_score: 292
  • Evalue 3.00e-76

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAATCCGTCGTGCAACCTGTTCATCGTCGGTCCGACCGGTGCCGGCAAGACCTCGGTCGGCAGGCGGCTCGCCGTGCATTATGGGCTCTCGTTCATCGATCTCGACCAGGAGGTCGAGCAGCATTGCGGCGTGGACGTGAGCACCGTGTTCGAGGTCGAGGGCGAAGCCGGCTTCCGCCAGCGCGAGAGCGCGCAGCTGGAAGCGCTGAGCCAGCGCTGCGGCATGCTGCTGGCGACCGGCGCGGGTGCCGTGCTGGCGAGCGACAACCGCCGCTGGCTGAGCCAGCGCGGTTTCGTGGTGTGGCTGCAGGCCAGCGTGGAGCAGCAACTCGAACGCCTCGAACGCGACCATCGTCGCCCGCTGCTGGCTGTGCCCGACCGCCTCGCGCGCCTGCAGGCGATGGCCAGCGTGCGCGAGCCGATCTACCGCGAACTTGCCGACCTCGCCGTGCCCGGCCACCATGGCAGTGTCGGCGCCGCCAGCGAGCGCTGCATTGCCCTGATCGATGCGCACTGGCAACGCGCCCCTCTTTCCTGTCCCCCGCACCACGCATGA
PROTEIN sequence
Length: 186
MNPSCNLFIVGPTGAGKTSVGRRLAVHYGLSFIDLDQEVEQHCGVDVSTVFEVEGEAGFRQRESAQLEALSQRCGMLLATGAGAVLASDNRRWLSQRGFVVWLQASVEQQLERLERDHRRPLLAVPDRLARLQAMASVREPIYRELADLAVPGHHGSVGAASERCIALIDAHWQRAPLSCPPHHA*