ggKbase home page

scnpilot_solids2_trim150_scaffold_2561_5

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 6745..7812

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 350.0
  • Bit_score: 645
  • Evalue 4.90e-182
uroporphyrinogen decarboxylase (EC:4.1.1.37) similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 355.0
  • Bit_score: 644
  • Evalue 2.40e-182
Uroporphyrinogen decarboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 350.0
  • Bit_score: 645
  • Evalue 3.50e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGCCCGATGCCCTGAACAACGACCGCTTCCTGCGCGCGCTGCGCCGCGAGCCCACCGACACCACGCCGATCTGGGTGATGCGCCAGGCGGGCCGCTACCTGCCCGAGTACCGCGCCACCCGCGAGCGCGCCGGCAGCTTCATGGGCCTGGCGCAGAACCCGGAATACGCCTGCGAAGTGACCCTGCAACCGCTGCGGCGTTTCGACCTCGACGCGGCGATCCTGTTTTCCGACATCCTCACCATTCCCGACGCGATGGGCCTCGGCCTCTCGTTTGCGCACGGCGAAGGCCCGCAGTTCGCGCGCCCCGTCCGCACCGCGGCGGACATCACCCGGCTCGCCGTGCCGGACATGGATGGCGAACTGCGCTACGTGATGGACGCGGTGCGGCTGATCCGCCGCGAACTGCACGGCCGCGTGCCGTTGATCGGTTTTTCCGGCAGCCCGTGGACGCTGGCCTGCTACATGGTCGAGGGCCACGGCTCGCGCGATTTCGCCACGCTCAAGACGCTGTGCTGGAACGAGCCGAAACTCGCCCACCAGCTGCTCGACACGCTGGCCCAGGCGGTGACCGCCTACCTGCTCGCCCAGGCCACGGCCGGCGCGCAGGCGCTGATGATCTTCGACACCTGGGGCGGCCTGCTCGGCCCGGCGCCGTTCCGCGAGTTCTCGCTGCGCTACATGACGCGGATCGTGGCCGCGCTGAAAGAGCACGCCGCTTCGCGCGAACTGCCGGTGATCCTGTTCTCCAAGGGCGCCCATGGCCAGTTGGCGGCGCTGGCCGACAGCGGCTGCGCGGCGCTTGGCGTGGACTGGACGGTCGACCTGGCCGACGCGCGTGCCGCCGTGGCGGGCCGCGTGGCGCTGCAAGGCAACCTCGATCCGGCGATCCTGCGCGCCAGCCCGGCGGTGATCCGCCGCGAGGCCCGCGCGGTGATGGACAGCTACGGCAACCACCCCGGCCACGTGTTCAACCTCGGCCACGGCATCACCCCGGAGGTCGATCCCGAGCACGTCAAGGTGCTGGTGGACGAGGTGCACGCCTACGGGCGCACGCTGCGCGCCTGA
PROTEIN sequence
Length: 356
MPDALNNDRFLRALRREPTDTTPIWVMRQAGRYLPEYRATRERAGSFMGLAQNPEYACEVTLQPLRRFDLDAAILFSDILTIPDAMGLGLSFAHGEGPQFARPVRTAADITRLAVPDMDGELRYVMDAVRLIRRELHGRVPLIGFSGSPWTLACYMVEGHGSRDFATLKTLCWNEPKLAHQLLDTLAQAVTAYLLAQATAGAQALMIFDTWGGLLGPAPFREFSLRYMTRIVAALKEHAASRELPVILFSKGAHGQLAALADSGCAALGVDWTVDLADARAAVAGRVALQGNLDPAILRASPAVIRREARAVMDSYGNHPGHVFNLGHGITPEVDPEHVKVLVDEVHAYGRTLRA*